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4930555K19Rik RIKEN cDNA 4930555K19 gene [ Mus musculus (house mouse) ]

Gene ID: 100418302, updated on 2-Nov-2024

Summary

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Official Symbol
4930555K19Rikprovided by MGI
Official Full Name
RIKEN cDNA 4930555K19 geneprovided by MGI
Primary source
MGI:MGI:1922612
See related
Ensembl:ENSMUSG00000130787 AllianceGenome:MGI:1922612
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Is expressed in several structures, including central nervous system; female reproductive system; and urinary system. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See 4930555K19Rik in Genome Data Viewer
Location:
15 B3.1; 15 15.74 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (41037097..41038821)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (41173701..41175425)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene zinc finger protein, multitype 2 Neighboring gene peptidylprolyl isomerase A pseudogene 25 Neighboring gene predicted gene, 33353 Neighboring gene STARR-seq mESC enhancer starr_38507 Neighboring gene STARR-seq mESC enhancer starr_38508 Neighboring gene STARR-seq mESC enhancer starr_38510 Neighboring gene STARR-seq mESC enhancer starr_38511 Neighboring gene STARR-seq mESC enhancer starr_38512 Neighboring gene STARR-seq mESC enhancer starr_38513 Neighboring gene STARR-seq mESC enhancer starr_38514 Neighboring gene predicted gene, 46502 Neighboring gene STARR-seq mESC enhancer starr_38515 Neighboring gene STARR-seq mESC enhancer starr_38516 Neighboring gene STARR-seq mESC enhancer starr_38517 Neighboring gene STARR-seq mESC enhancer starr_38518 Neighboring gene STARR-seq mESC enhancer starr_38519 Neighboring gene predicted gene, 33557 Neighboring gene predicted gene, 41312

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract. Wiese CB, et al. Front Neurosci, 2012. PMID 22988430, Free PMC Article
  2. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, et al. Science, 2004 Dec 24. PMID 15618518
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • leucine rich repeat and sterile alpha motif containing 1 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_151516.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC157550, AK016133
    Related
    ENSMUST00000301919.1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    41037097..41038821
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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