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A530072M11Rik RIKEN cDNA gene A530072M11 [ Mus musculus (house mouse) ]

Gene ID: 100415915, updated on 22-Oct-2024

Summary

Official Symbol
A530072M11Rikprovided by MGI
Official Full Name
RIKEN cDNA gene A530072M11provided by MGI
Primary source
MGI:MGI:4440477
See related
Ensembl:ENSMUSG00000085112 AllianceGenome:MGI:4440477
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

See A530072M11Rik in Genome Data Viewer
Location:
4 A2; 4 6.71 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (16164110..16266225)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (16164110..16266225)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene oxidative stress induced growth inhibitor family member 2 Neighboring gene STARR-positive B cell enhancer ABC_E1638 Neighboring gene STARR-positive B cell enhancer ABC_E1028 Neighboring gene STARR-seq mESC enhancer starr_09657 Neighboring gene receptor (TNFRSF)-interacting serine-threonine kinase 2 Neighboring gene STARR-seq mESC enhancer starr_09658 Neighboring gene mortality factor 4 like 2 pseudogene Neighboring gene STARR-seq mESC enhancer starr_09660 Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_09662 Neighboring gene STARR-seq mESC enhancer starr_09663 Neighboring gene predicted gene, 24978

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045765.2 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AK080160
    Related
    ENSMUST00000151122.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    16164110..16266225
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)