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CNOT7 CCR4-NOT transcription complex subunit 7 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100415404, updated on 11-Apr-2024

Summary

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Gene symbol
CNOT7
Gene description
CCR4-NOT transcription complex subunit 7
See related
Ensembl:ENSCJAG00000011795
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See CNOT7 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 13 NC_071454.1 (21307526..21327791)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 13 NC_048395.1 (21394173..21413927)

Chromosome 13 - NC_071454.1Genomic Context describing neighboring genes Neighboring gene potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4-like Neighboring gene myotubularin related protein 7 Neighboring gene VPS37A subunit of ESCRT-I Neighboring gene 40S ribosomal protein S27-like Neighboring gene zinc finger DHHC-type palmitoyltransferase 2 Neighboring gene mitochondrial calcium uptake family member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables poly(A)-specific ribonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CCR4-NOT complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of CCR4-NOT core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CCR4-NOT transcription complex subunit 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071454.1 Reference mCalJa1.2.pat.X

    Range
    21307526..21327791
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002756903.5 → XP_002756949.1  CCR4-NOT transcription complex subunit 7 isoform X1

    See identical proteins and their annotated locations for XP_002756949.1

    UniProtKB/TrEMBL
    F6QE98, U3DQZ2
    Related
    ENSCJAP00000021686.1
    Conserved Domains (1) summary
    cl23804
    Location:1 → 279
    CAF1; CAF1 family ribonuclease

  2. XM_035270209.2 → XP_035126100.1  CCR4-NOT transcription complex subunit 7 isoform X2

    Conserved Domains (1) summary
    cl23804
    Location:2 → 198
    CAF1; CAF1 family ribonuclease
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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