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PFKFB1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100412706, updated on 10-Oct-2024

Summary

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Gene symbol
PFKFB1
Gene description
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See PFKFB1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) X NC_071464.1 (53523988..53588632, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) X NC_048405.1 (53436869..53501479, complement)

Chromosome X - NC_071464.1Genomic Context describing neighboring genes Neighboring gene keratin, type II cytoskeletal 8-like Neighboring gene trophinin Neighboring gene small nucleolar RNA SNORA11 Neighboring gene apurinic/apyrimidinic endodeoxyribonuclease 2 Neighboring gene 5'-aminolevulinate synthase 2 Neighboring gene P antigen family member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 6-phosphofructo-2-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fructose-2,6-bisphosphate 2-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fructose 2,6-bisphosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fructose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071464.1 Reference mCalJa1.2.pat.X

    Range
    53523988..53588632 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054251163.1 → XP_054107138.1  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 isoform X5

  2. XM_054251164.1 → XP_054107139.1  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 isoform X5

  3. XM_054251168.1 → XP_054107143.1  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 isoform X9

  4. XM_054251162.1 → XP_054107137.1  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 isoform X4

  5. XM_054251160.1 → XP_054107135.1  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 isoform X2

  6. XM_054251159.1 → XP_054107134.1  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 isoform X1

    UniProtKB/TrEMBL
    F6WV72

  7. XM_035287579.2 → XP_035143470.1  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 isoform X8

    UniProtKB/TrEMBL
    A0A5F4WE35
    Conserved Domains (2) summary
    pfam00300
    Location:262 → 537
    His_Phos_1; Histidine phosphatase superfamily (branch 1)
    pfam01591
    Location:38 → 259
    6PF2K; 6-phosphofructo-2-kinase

  8. XM_035287578.2 → XP_035143469.1  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 isoform X7

    UniProtKB/TrEMBL
    A0A5F4WE35, A0A5F4WIM4
    Conserved Domains (2) summary
    pfam00300
    Location:262 → 538
    His_Phos_1; Histidine phosphatase superfamily (branch 1)
    pfam01591
    Location:38 → 259
    6PF2K; 6-phosphofructo-2-kinase

  9. XM_035287588.2 → XP_035143479.1  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 isoform X11

    UniProtKB/TrEMBL
    F7IH15
    Conserved Domains (2) summary
    pfam00300
    Location:240 → 426
    His_Phos_1; Histidine phosphatase superfamily (branch 1)
    pfam01591
    Location:38 → 237
    6PF2K; 6-phosphofructo-2-kinase

  10. XM_035287587.2 → XP_035143478.1  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 isoform X10

    UniProtKB/TrEMBL
    A0A5F4WEE4, F7IH15
    Conserved Domains (2) summary
    pfam00300
    Location:262 → 448
    His_Phos_1; Histidine phosphatase superfamily (branch 1)
    pfam01591
    Location:38 → 259
    6PF2K; 6-phosphofructo-2-kinase

  11. XM_054251167.1 → XP_054107142.1  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 isoform X9

  12. XM_054251161.1 → XP_054107136.1  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 isoform X3

  13. XM_054251165.1 → XP_054107140.1  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 isoform X6

Nucleotide Protein
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