U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CLEC14A C-type lectin domain containing 14A [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100412628, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CLEC14A
Gene description
C-type lectin domain containing 14A
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CLEC14A in Genome Data Viewer
Location:
chromosome: 10
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 10 NC_071451.1 (68799884..68803091, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 10 NC_048392.1 (69441556..69444767, complement)

Chromosome 10 - NC_071451.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat domain 6 Neighboring gene U6 spliceosomal RNA Neighboring gene somatostatin receptor 1 Neighboring gene 60S ribosomal protein L13a-like Neighboring gene 60 kDa heat shock protein, mitochondrial-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables extracellular matrix protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
C-type lectin domain family 14 member A

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071451.1 Reference mCalJa1.2.pat.X

    Range
    68799884..68803091 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002753835.5 → XP_002753881.3  C-type lectin domain family 14 member A

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.