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PRR3 proline rich 3 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100410065, updated on 8-Mar-2024

Summary

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Gene symbol
PRR3
Gene description
proline rich 3
See related
Ensembl:ENSCJAG00000019988
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See PRR3 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 4 NC_071445.1 (32602649..32609651)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 4 NC_048386.1 (33712255..33719785)

Chromosome 4 - NC_071445.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S12-like Neighboring gene G protein nucleolar 1 (putative) Neighboring gene ATP binding cassette subfamily F member 1 Neighboring gene translation machinery-associated protein 7-like Neighboring gene protein phosphatase 1 regulatory subunit 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proline-rich protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071445.1 Reference mCalJa1.2.pat.X

    Range
    32602649..32609651
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002746304.5 → XP_002746350.2  proline-rich protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A2R8M650, U3BDA5
    Related
    ENSCJAP00000037191.2
    Conserved Domains (1) summary
    pfam00642
    Location:197 → 221
    zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)

  2. XM_008994108.4 → XP_008992356.2  proline-rich protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A2R8M7U0
    Related
    ENSCJAP00000037195.2
Nucleotide Protein
Heading Accession and Version

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