U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GALNT18 polypeptide N-acetylgalactosaminyltransferase 18 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100409651, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
GALNT18
Gene description
polypeptide N-acetylgalactosaminyltransferase 18
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Also known as
GALNTL4
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See GALNT18 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 11 NC_071452.1 (73784500..74200994, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 11 NC_048393.1 (74975438..75388746, complement)

Chromosome 11 - NC_071452.1Genomic Context describing neighboring genes Neighboring gene activating transcription factor 7-interacting protein 2-like Neighboring gene non-histone chromosomal protein HMG-14-like Neighboring gene ubiquitin specific peptidase 47 Neighboring gene dickkopf WNT signaling pathway inhibitor 3

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
polypeptide N-acetylgalactosaminyltransferase 18
Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4
putative polypeptide N-acetylgalactosaminyltransferase-like protein 4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071452.1 Reference mCalJa1.2.pat.X

    Range
    73784500..74200994 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035265780.2 → XP_035121671.2  polypeptide N-acetylgalactosaminyltransferase 18 isoform X3

  2. XM_035265778.2 → XP_035121669.2  polypeptide N-acetylgalactosaminyltransferase 18 isoform X1

    UniProtKB/TrEMBL
    A0A8I3WYP2

  3. XM_035265779.2 → XP_035121670.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X2

    UniProtKB/TrEMBL
    A0A8I3WNB6, U3BHH5

  4. XM_035265781.2 → XP_035121672.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X4

    UniProtKB/TrEMBL
    A0A8I3WNB6
    Conserved Domains (2) summary
    cd00161
    Location:409 → 536
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    cl11394
    Location:157 → 396
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.