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BCAP31 B cell receptor associated protein 31 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100409012, updated on 8-Mar-2024

Summary

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Gene symbol
BCAP31
Gene description
B cell receptor associated protein 31
See related
Ensembl:ENSCJAG00000011348
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See BCAP31 in Genome Data Viewer
Location:
chromosome: X
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) X NC_071464.1 (144974077..145002130, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) X NC_048405.1 (146241005..146269058, complement)

Chromosome X - NC_071464.1Genomic Context describing neighboring genes Neighboring gene pregnancy up-regulated nonubiquitous CaM kinase Neighboring gene solute carrier family 6 member 8 Neighboring gene ATP binding cassette subfamily D member 1 Neighboring gene cytochrome b-c1 complex subunit 7-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development of the first marmoset-specific DNA microarray (EUMAMA): a new genetic tool for large-scale expression profiling in a non-human primate. Datson NA, et al. BMC Genomics, 2007 Jun 25. PMID 17592630, Free PMC Article
  2. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to endoplasmic reticulum exit site IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
B-cell receptor-associated protein 31
Names
B-cell receptor-associated protein 31-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071464.1 Reference mCalJa1.2.pat.X

    Range
    144974077..145002130 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035288037.1 → XP_035143928.1  B-cell receptor-associated protein 31 isoform X2

    UniProtKB/TrEMBL
    F7FI52
    Conserved Domains (2) summary
    pfam05529
    Location:1 → 136
    Bap31; B-cell receptor-associated protein 31-like
    pfam18035
    Location:193 → 246
    Bap31_Bap29_C; Bap31/Bap29 cytoplasmic coiled-coil domain

  2. XM_035288033.1 → XP_035143924.1  B-cell receptor-associated protein 31 isoform X1

    Conserved Domains (3) summary
    PRK02224
    Location:134 → 229
    PRK02224; DNA double-strand break repair Rad50 ATPase
    pfam05529
    Location:1 → 136
    Bap31; B-cell receptor-associated protein 31-like
    pfam18035
    Location:193 → 234
    Bap31_Bap29_C; Bap31/Bap29 cytoplasmic coiled-coil domain

  3. XM_035288038.1 → XP_035143929.1  B-cell receptor-associated protein 31 isoform X2

    UniProtKB/TrEMBL
    F7FI52
    Conserved Domains (2) summary
    pfam05529
    Location:1 → 136
    Bap31; B-cell receptor-associated protein 31-like
    pfam18035
    Location:193 → 246
    Bap31_Bap29_C; Bap31/Bap29 cytoplasmic coiled-coil domain

  4. XM_035288034.1 → XP_035143925.1  B-cell receptor-associated protein 31 isoform X1

    Conserved Domains (3) summary
    PRK02224
    Location:134 → 229
    PRK02224; DNA double-strand break repair Rad50 ATPase
    pfam05529
    Location:1 → 136
    Bap31; B-cell receptor-associated protein 31-like
    pfam18035
    Location:193 → 234
    Bap31_Bap29_C; Bap31/Bap29 cytoplasmic coiled-coil domain

  5. XM_035288035.1 → XP_035143926.1  B-cell receptor-associated protein 31 isoform X1

    Conserved Domains (3) summary
    PRK02224
    Location:134 → 229
    PRK02224; DNA double-strand break repair Rad50 ATPase
    pfam05529
    Location:1 → 136
    Bap31; B-cell receptor-associated protein 31-like
    pfam18035
    Location:193 → 234
    Bap31_Bap29_C; Bap31/Bap29 cytoplasmic coiled-coil domain
Nucleotide Protein
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