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SUN1 Sad1 and UNC84 domain containing 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100408710, updated on 10-Oct-2024

Summary

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Gene symbol
SUN1
Gene description
Sad1 and UNC84 domain containing 1
See related
Ensembl:ENSCJAG00000015835
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See SUN1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 2 NC_071443.1 (56215066..56274111, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 2 NC_048384.1 (56480073..56538566, complement)

Chromosome 2 - NC_071443.1Genomic Context describing neighboring genes Neighboring gene ArfGAP with dual PH domains 1 Neighboring gene guided entry of tail-anchored proteins factor 4 Neighboring gene olfactory receptor 2V2-like Neighboring gene TBC1 domain family member 9B-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-membrane adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear envelope organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of meiotic nuclear membrane microtubule tethering complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nuclear envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SUN domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071443.1 Reference mCalJa1.2.pat.X

    Range
    56215066..56274111 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008989211.4 → XP_008987459.1  SUN domain-containing protein 1 isoform X22

    UniProtKB/TrEMBL
    U3DIT4
    Conserved Domains (3) summary
    pfam07738
    Location:608 → 743
    Sad1_UNC; Sad1 / UNC-like C-terminal
    pfam09387
    Location:72 → 257
    MRP; Mitochondrial RNA binding protein MRP
    cl21521
    Location:399 → 514
    PEPcase; Phosphoenolpyruvate carboxylase

  2. XM_008989207.4 → XP_008987455.1  SUN domain-containing protein 1 isoform X21

    UniProtKB/TrEMBL
    U3DIT4
    Conserved Domains (3) summary
    pfam07738
    Location:609 → 744
    Sad1_UNC; Sad1 / UNC-like C-terminal
    pfam09387
    Location:72 → 257
    MRP; Mitochondrial RNA binding protein MRP
    cl21521
    Location:400 → 515
    PEPcase; Phosphoenolpyruvate carboxylase

  3. XM_008989201.4 → XP_008987449.2  SUN domain-containing protein 1 isoform X19

  4. XM_008989198.4 → XP_008987446.2  SUN domain-containing protein 1 isoform X18

    UniProtKB/TrEMBL
    A0A2R8P594

  5. XM_035290131.2 → XP_035146022.1  SUN domain-containing protein 1 isoform X17

    UniProtKB/TrEMBL
    F7I378
    Conserved Domains (5) summary
    TIGR00618
    Location:348 → 553
    sbcc; exonuclease SbcC
    pfam07738
    Location:646 → 781
    Sad1_UNC; Sad1 / UNC-like C-terminal
    pfam09387
    Location:65 → 294
    MRP; Mitochondrial RNA binding protein MRP
    pfam18580
    Location:545 → 603
    Sun2_CC2; SUN2 coiled coil domain 2
    cd21439
    Location:420 → 470
    SUN1_cc1; coiled-coil domain 1 of SUN domain-containing protein 1 and similar proteins

  6. XM_017969293.3 → XP_017824782.2  SUN domain-containing protein 1 isoform X12

  7. XM_017969291.3 → XP_017824780.2  SUN domain-containing protein 1 isoform X11

  8. XM_035290120.2 → XP_035146011.2  SUN domain-containing protein 1 isoform X15

  9. XM_035290109.2 → XP_035146000.2  SUN domain-containing protein 1 isoform X14

  10. XM_035290100.2 → XP_035145991.1  SUN domain-containing protein 1 isoform X13

    UniProtKB/TrEMBL
    U3DIT4
    Conserved Domains (5) summary
    TIGR00618
    Location:376 → 581
    sbcc; exonuclease SbcC
    pfam07738
    Location:674 → 809
    Sad1_UNC; Sad1 / UNC-like C-terminal
    pfam09387
    Location:65 → 322
    MRP; Mitochondrial RNA binding protein MRP
    pfam18580
    Location:573 → 631
    Sun2_CC2; SUN2 coiled coil domain 2
    cd21439
    Location:448 → 498
    SUN1_cc1; coiled-coil domain 1 of SUN domain-containing protein 1 and similar proteins

  11. XM_035290067.2 → XP_035145958.2  SUN domain-containing protein 1 isoform X9

  12. XM_008989187.4 → XP_008987435.2  SUN domain-containing protein 1 isoform X8

    UniProtKB/TrEMBL
    A0A2R8N071

  13. XM_035290049.2 → XP_035145940.2  SUN domain-containing protein 1 isoform X6

  14. XM_008989184.4 → XP_008987432.2  SUN domain-containing protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A2R8MTF3

  15. XM_035290047.2 → XP_035145938.1  SUN domain-containing protein 1 isoform X4

    UniProtKB/TrEMBL
    F7I378
    Conserved Domains (5) summary
    TIGR00618
    Location:441 → 646
    sbcc; exonuclease SbcC
    pfam07738
    Location:739 → 874
    Sad1_UNC; Sad1 / UNC-like C-terminal
    pfam09387
    Location:65 → 388
    MRP; Mitochondrial RNA binding protein MRP
    pfam18580
    Location:638 → 696
    Sun2_CC2; SUN2 coiled coil domain 2
    cd21439
    Location:513 → 563
    SUN1_cc1; coiled-coil domain 1 of SUN domain-containing protein 1 and similar proteins

  16. XM_035290044.2 → XP_035145935.1  SUN domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A5F4WDT4, F7I378
    Conserved Domains (5) summary
    TIGR00618
    Location:442 → 647
    sbcc; exonuclease SbcC
    pfam07738
    Location:740 → 875
    Sad1_UNC; Sad1 / UNC-like C-terminal
    pfam09387
    Location:65 → 388
    MRP; Mitochondrial RNA binding protein MRP
    pfam18580
    Location:639 → 697
    Sun2_CC2; SUN2 coiled coil domain 2
    cd21439
    Location:514 → 564
    SUN1_cc1; coiled-coil domain 1 of SUN domain-containing protein 1 and similar proteins

  17. XM_008989181.4 → XP_008987429.2  SUN domain-containing protein 1 isoform X2

  18. XM_017969278.3 → XP_017824767.2  SUN domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2R8M6T8

  19. XM_054251483.1 → XP_054107458.1  SUN domain-containing protein 1 isoform X23

  20. XM_054251486.1 → XP_054107461.1  SUN domain-containing protein 1 isoform X24

  21. XM_054251469.1 → XP_054107444.1  SUN domain-containing protein 1 isoform X16

  22. XM_054251446.1 → XP_054107421.1  SUN domain-containing protein 1 isoform X7

  23. XM_054251452.1 → XP_054107427.1  SUN domain-containing protein 1 isoform X10

  24. XM_054251478.1 → XP_054107453.1  SUN domain-containing protein 1 isoform X20

  25. XM_008989174.4 → XP_008987422.2  SUN domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2R8M6T8

  26. XM_017969312.3 → XP_017824801.1  SUN domain-containing protein 1 isoform X25

    Conserved Domains (1) summary
    pfam09387
    Location:72 → 223
    MRP; Mitochondrial RNA binding protein MRP
Nucleotide Protein
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