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ST6GAL1 ST6 beta-galactoside alpha-2,6-sialyltransferase 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100408699, updated on 8-Mar-2024

Summary

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Gene symbol
ST6GAL1
Gene description
ST6 beta-galactoside alpha-2,6-sialyltransferase 1
See related
Ensembl:ENSCJAG00000014462
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See ST6GAL1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 15 NC_071456.1 (9633613..9790868)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 15 NC_048397.1 (10353371..10510693)

Chromosome 15 - NC_071456.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118147777 Neighboring gene adiponectin, C1Q and collagen domain containing Neighboring gene ribosomal protein L39 like Neighboring gene receptor transporter protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-galactoside alpha-2,6-sialyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071456.1 Reference mCalJa1.2.pat.X

    Range
    9633613..9790868
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008981363.4 → XP_008979611.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_008979611.1

    UniProtKB/TrEMBL
    F7I274
    Conserved Domains (1) summary
    pfam00777
    Location:177 → 384
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_035274710.2 → XP_035130601.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    F7I274
    Conserved Domains (1) summary
    pfam00777
    Location:177 → 384
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_035274713.2 → XP_035130604.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    F7I274
    Conserved Domains (1) summary
    pfam00777
    Location:177 → 384
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_035274711.2 → XP_035130602.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    F7I274
    Conserved Domains (1) summary
    pfam00777
    Location:177 → 384
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  5. XM_035274712.2 → XP_035130603.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    F7I274
    Conserved Domains (1) summary
    pfam00777
    Location:177 → 384
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  6. XM_017964746.3 → XP_017820235.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    F7I274
    Conserved Domains (1) summary
    pfam00777
    Location:177 → 384
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  7. XM_035274715.2 → XP_035130606.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    F7I274
    Conserved Domains (1) summary
    pfam00777
    Location:177 → 384
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  8. XM_008981359.4 → XP_008979607.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_008979607.1

    UniProtKB/TrEMBL
    F7I274
    Conserved Domains (1) summary
    pfam00777
    Location:177 → 384
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  9. XM_008981361.4 → XP_008979609.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_008979609.1

    UniProtKB/TrEMBL
    F7I274
    Conserved Domains (1) summary
    pfam00777
    Location:177 → 384
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  10. XM_035274720.2 → XP_035130611.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X2

    Conserved Domains (1) summary
    pfam00777
    Location:24 → 153
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  11. XM_054245464.1 → XP_054101439.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X2

  12. XM_017964754.3 → XP_017820243.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X2

    Conserved Domains (1) summary
    pfam00777
    Location:24 → 153
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  13. XM_035274714.2 → XP_035130605.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    F7I274
    Conserved Domains (1) summary
    pfam00777
    Location:177 → 384
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  14. XM_035274716.2 → XP_035130607.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    F7I274
    Conserved Domains (1) summary
    pfam00777
    Location:177 → 384
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  15. XM_035274717.2 → XP_035130608.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    F7I274
    Conserved Domains (1) summary
    pfam00777
    Location:177 → 384
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  16. XM_035274719.2 → XP_035130610.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    F7I274
    Conserved Domains (1) summary
    pfam00777
    Location:177 → 384
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  17. XM_054245465.1 → XP_054101440.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X2

  18. XM_008981360.4 → XP_008979608.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_008979608.1

    UniProtKB/TrEMBL
    F7I274
    Conserved Domains (1) summary
    pfam00777
    Location:177 → 384
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  19. XM_035274718.2 → XP_035130609.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    F7I274
    Conserved Domains (1) summary
    pfam00777
    Location:177 → 384
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  20. XM_008981364.4 → XP_008979612.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_008979612.1

    UniProtKB/TrEMBL
    F7I274
    Conserved Domains (1) summary
    pfam00777
    Location:177 → 384
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  21. XM_008981365.4 → XP_008979613.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_008979613.1

    UniProtKB/TrEMBL
    F7I274
    Conserved Domains (1) summary
    pfam00777
    Location:177 → 384
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  22. XM_008981362.4 → XP_008979610.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_008979610.1

    UniProtKB/TrEMBL
    F7I274
    Conserved Domains (1) summary
    pfam00777
    Location:177 → 384
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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