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FYTTD1 forty-two-three domain containing 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100407869, updated on 10-Oct-2024

Summary

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Gene symbol
FYTTD1
Gene description
forty-two-three domain containing 1
See related
Ensembl:ENSCJAG00000016488
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See FYTTD1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 17 NC_071458.1 (74370616..74404182)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 17 NC_048399.1 (74548933..74582688)

Chromosome 17 - NC_071458.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128930048 Neighboring gene rubicon autophagy regulator Neighboring gene tyrosine-protein phosphatase non-receptor type 2-like Neighboring gene leucine rich repeats and calponin homology domain containing 3 Neighboring gene U6 spliceosomal RNA Neighboring gene IQ motif containing G Neighboring gene ribosomal protein L35a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UAP56-interacting factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071458.1 Reference mCalJa1.2.pat.X

    Range
    74370616..74404182
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002759776.5 → XP_002759822.3  UAP56-interacting factor isoform X1

    UniProtKB/TrEMBL
    F7D7P1

  2. XM_008984122.4 → XP_008982370.2  UAP56-interacting factor isoform X3

  3. XM_054247238.1 → XP_054103213.1  UAP56-interacting factor isoform X2

  4. XM_035278437.2 → XP_035134328.2  UAP56-interacting factor isoform X4

  5. XM_035278438.2 → XP_035134329.2  UAP56-interacting factor isoform X4

  6. XM_054247240.1 → XP_054103215.1  UAP56-interacting factor isoform X4

Nucleotide Protein
Heading Accession and Version

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