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TARS1 threonyl-tRNA synthetase 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100406788, updated on 8-Mar-2024

Summary

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Gene symbol
TARS1
Gene description
threonyl-tRNA synthetase 1
See related
Ensembl:ENSCJAG00000018663
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Also known as
TARS
Orthologs
human mouse all
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Genomic context

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See TARS1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 2 NC_071443.1 (168598852..168625431, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 2 NC_048384.1 (170197610..170224211, complement)

Chromosome 2 - NC_071443.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene relaxin family peptide receptor 3 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 12 Neighboring gene melanoma inhibitory activity protein 2-like Neighboring gene dynamin-2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables threonine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in threonyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
threonine--tRNA ligase 1, cytoplasmic
Names
threonine--tRNA ligase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071443.1 Reference mCalJa1.2.pat.X

    Range
    168598852..168625431 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002745076.6 → XP_002745122.1  threonine--tRNA ligase 1, cytoplasmic

    See identical proteins and their annotated locations for XP_002745122.1

    UniProtKB/TrEMBL
    A0A8I3WJ54, U3FHJ0
    Related
    ENSCJAP00000034744.2
    Conserved Domains (1) summary
    cl28417
    Location:44 → 716
    ThrS; Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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