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GPX8 glutathione peroxidase 8 (putative) [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100406786, updated on 8-Mar-2024

Summary

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Gene symbol
GPX8
Gene description
glutathione peroxidase 8 (putative)
See related
Ensembl:ENSCJAG00000001669
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See GPX8 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 2 NC_071443.1 (151497288..151501963, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 2 NC_048384.1 (153120892..153125569, complement)

Chromosome 2 - NC_071443.1Genomic Context describing neighboring genes Neighboring gene cyclin O Neighboring gene multiciliate differentiation and DNA synthesis associated cell cycle protein Neighboring gene cell division cycle 20B Neighboring gene succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial-like Neighboring gene granzyme A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutathione peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable glutathione peroxidase 8
Names
putative glutathione peroxidase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071443.1 Reference mCalJa1.2.pat.X

    Range
    151497288..151501963 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017969916.3 → XP_017825405.1  probable glutathione peroxidase 8 isoform X2

  2. XM_002744975.5 → XP_002745021.1  probable glutathione peroxidase 8 isoform X1

    See identical proteins and their annotated locations for XP_002745021.1

    UniProtKB/TrEMBL
    A0A2R8M6S6, F7ISV1, U3CBR5
    Related
    ENSCJAP00000002992.2
    Conserved Domains (1) summary
    TIGR02540
    Location:46 → 198
    gpx7; putative glutathione peroxidase Gpx7
Nucleotide Protein
Heading Accession and Version

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