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FNBP1L formin binding protein 1 like [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100405015, updated on 10-Oct-2024

Summary

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Gene symbol
FNBP1L
Gene description
formin binding protein 1 like
See related
Ensembl:ENSCJAG00000017821
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See FNBP1L in Genome Data Viewer
Location:
chromosome: 7
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 7 NC_071448.1 (128567000..128668546)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 7 NC_048389.1 (129951593..130067633)

Chromosome 7 - NC_071448.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128928287 Neighboring gene lysosomal-associated transmembrane protein 4B-like Neighboring gene down-regulator of transcription 1 Neighboring gene uncharacterized LOC128928327 Neighboring gene uncharacterized LOC103794570 Neighboring gene BCAR3 adaptor protein, NSP family member

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
formin-binding protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071448.1 Reference mCalJa1.2.pat.X

    Range
    128567000..128668546
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035252187.2 → XP_035108078.1  formin-binding protein 1-like isoform X1

    UniProtKB/TrEMBL
    F7GJ26
    Conserved Domains (3) summary
    cd07675
    Location:5 → 256
    F-BAR_FNBP1L; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Formin Binding Protein 1-Like
    cd11628
    Location:399 → 479
    HR1_CIP4_FNBP1L; Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of vertebrate Cdc42-Interacting Protein 4 and FormiN Binding Protein 1-Like
    cd12072
    Location:541 → 597
    SH3_FNBP1L; Src Homology 3 domain of Formin Binding Protein 1-Like

  2. XM_009001730.4 → XP_008999978.1  formin-binding protein 1-like isoform X2

    See identical proteins and their annotated locations for XP_008999978.1

    UniProtKB/TrEMBL
    A0A2R8NF11, F7G804, U3CMX5
    Related
    ENSCJAP00000032970.2
    Conserved Domains (3) summary
    cd07675
    Location:5 → 256
    F-BAR_FNBP1L; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Formin Binding Protein 1-Like
    cd11628
    Location:399 → 479
    HR1_CIP4_FNBP1L; Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of vertebrate Cdc42-Interacting Protein 4 and FormiN Binding Protein 1-Like
    cd12072
    Location:541 → 597
    SH3_FNBP1L; Src Homology 3 domain of Formin Binding Protein 1-Like

  3. XM_054236916.1 → XP_054092891.1  formin-binding protein 1-like isoform X3

  4. XM_054236919.1 → XP_054092894.1  formin-binding protein 1-like isoform X5

  5. XM_054236920.1 → XP_054092895.1  formin-binding protein 1-like isoform X6

    UniProtKB/TrEMBL
    U3D9Y6

  6. XM_035252190.2 → XP_035108081.1  formin-binding protein 1-like isoform X7

    UniProtKB/TrEMBL
    A0A5K1V253, F7GIQ0, U3CKU9
    Conserved Domains (3) summary
    cd07675
    Location:5 → 256
    F-BAR_FNBP1L; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Formin Binding Protein 1-Like
    cd11628
    Location:341 → 421
    HR1_CIP4_FNBP1L; Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of vertebrate Cdc42-Interacting Protein 4 and FormiN Binding Protein 1-Like
    cd12072
    Location:483 → 539
    SH3_FNBP1L; Src Homology 3 domain of Formin Binding Protein 1-Like

  7. XM_009001731.4 → XP_008999979.3  formin-binding protein 1-like isoform X4

  8. XM_054236917.1 → XP_054092892.1  formin-binding protein 1-like isoform X4

  9. XM_054236918.1 → XP_054092893.1  formin-binding protein 1-like isoform X4

  10. XM_035252194.2 → XP_035108085.2  formin-binding protein 1-like isoform X8

Nucleotide Protein
Heading Accession and Version

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