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TARS3 threonyl-tRNA synthetase 3 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100404769, updated on 6-Jun-2024

Summary

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Gene symbol
TARS3
Gene description
threonyl-tRNA synthetase 3
See related
Ensembl:ENSCJAG00000017350
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Also known as
TARSL2
Orthologs
human mouse all
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Genomic context

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See TARS3 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 6 NC_071447.1 (6516293..6575909)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 6 NC_048388.1 (6570555..6630173)

Chromosome 6 - NC_071447.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene tight junction protein 1 Neighboring gene uncharacterized LOC108592114 Neighboring gene uncharacterized LOC128932309 Neighboring gene small nucleolar RNA U13 Neighboring gene U6 spliceosomal RNA Neighboring gene TM2 domain containing 3 Neighboring gene uncharacterized LOC103793590

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables threonine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in threonyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
threonine--tRNA ligase 2, cytoplasmic
Names
putative threonine--tRNA ligase 2, cytoplasmic
threonyl-tRNA synthetase like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071447.1 Reference mCalJa1.2.pat.X

    Range
    6516293..6575909
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054257191.1 → XP_054113166.1  threonine--tRNA ligase 2, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    U3DFU5

  2. XM_035303677.2 → XP_035159568.2  threonine--tRNA ligase 2, cytoplasmic isoform X2

    UniProtKB/TrEMBL
    F7IRD8, U3DFU5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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