U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

EXOC1 exocyst complex component 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100404729, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
EXOC1
Gene description
exocyst complex component 1
See related
Ensembl:ENSCJAG00000018175
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See EXOC1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 3 NC_071444.1 (137014133..137067175, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 3 NC_048385.1 (139587599..139640614, complement)

Chromosome 3 - NC_071444.1Genomic Context describing neighboring genes Neighboring gene centrosomal protein 135 Neighboring gene 60S ribosomal protein L7a-like Neighboring gene syncytin-2-like Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA SNORA47 Neighboring gene exocyst complex component 1 like Neighboring gene U6 spliceosomal RNA Neighboring gene copine-9-like Neighboring gene neuromedin U

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-4,5-bisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi to plasma membrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of exocyst IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
exocyst complex component 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071444.1 Reference mCalJa1.2.pat.X

    Range
    137014133..137067175 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002745817.6 → XP_002745863.1  exocyst complex component 1 isoform X8

    UniProtKB/TrEMBL
    A0A2R8MS72, F6TEL6, U3BV40
    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:184 → 856
    Sec3_C; Exocyst complex component Sec3

  2. XM_035293700.2 → XP_035149591.1  exocyst complex component 1 isoform X7

    UniProtKB/TrEMBL
    A0A2R8MS72, F6TEL6, U3DC78
    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:191 → 863
    Sec3_C; Exocyst complex component Sec3

  3. XM_035293701.2 → XP_035149592.1  exocyst complex component 1 isoform X8

    UniProtKB/TrEMBL
    A0A2R8MS72, F6TEL6, U3BV40
    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:184 → 856
    Sec3_C; Exocyst complex component Sec3

  4. XM_002745815.5 → XP_002745861.1  exocyst complex component 1 isoform X6

    UniProtKB/TrEMBL
    A0A8I3W917, U3FIW4
    Related
    ENSCJAP00000033737.2
    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:184 → 871
    Sec3_C; Exocyst complex component Sec3

  5. XM_035293696.2 → XP_035149587.1  exocyst complex component 1 isoform X5

    UniProtKB/TrEMBL
    A0A2R8MS72, F6TEL6
    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:184 → 874
    Sec3_C; Exocyst complex component Sec3

  6. XM_008993327.4 → XP_008991575.1  exocyst complex component 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I3W917
    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:184 → 889
    Sec3_C; Exocyst complex component Sec3

  7. XM_035293699.2 → XP_035149590.1  exocyst complex component 1 isoform X7

    UniProtKB/TrEMBL
    A0A2R8MS72, F6TEL6, U3DC78
    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:191 → 863
    Sec3_C; Exocyst complex component Sec3

  8. XM_008993330.4 → XP_008991578.1  exocyst complex component 1 isoform X4

    UniProtKB/TrEMBL
    A0A8I3W917, U3DVK3
    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:191 → 878
    Sec3_C; Exocyst complex component Sec3

  9. XM_008993329.4 → XP_008991577.1  exocyst complex component 1 isoform X3

    UniProtKB/TrEMBL
    A0A2R8MS72, A0A2R8P398, F6TDJ1, F6TEL6
    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:191 → 881
    Sec3_C; Exocyst complex component Sec3

  10. XM_008993324.3 → XP_008991572.1  exocyst complex component 1 isoform X1

    UniProtKB/TrEMBL
    A0A2R8MK81, A0A8I3W917
    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:191 → 896
    Sec3_C; Exocyst complex component Sec3

  11. XM_035293694.2 → XP_035149585.1  exocyst complex component 1 isoform X3

    UniProtKB/TrEMBL
    A0A2R8MS72, A0A2R8P398, F6TDJ1, F6TEL6
    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:191 → 881
    Sec3_C; Exocyst complex component Sec3

  12. XM_002745816.6 → XP_002745862.1  exocyst complex component 1 isoform X6

    UniProtKB/TrEMBL
    A0A8I3W917, U3FIW4
    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:184 → 871
    Sec3_C; Exocyst complex component Sec3

  13. XM_035293698.2 → XP_035149589.1  exocyst complex component 1 isoform X5

    UniProtKB/TrEMBL
    A0A2R8MS72, F6TEL6
    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:184 → 874
    Sec3_C; Exocyst complex component Sec3

  14. XM_008993328.4 → XP_008991576.1  exocyst complex component 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I3W917
    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:184 → 889
    Sec3_C; Exocyst complex component Sec3

  15. XM_008993325.4 → XP_008991573.1  exocyst complex component 1 isoform X1

    UniProtKB/TrEMBL
    A0A2R8MK81, A0A8I3W917
    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:191 → 896
    Sec3_C; Exocyst complex component Sec3

  16. XM_035293695.2 → XP_035149586.1  exocyst complex component 1 isoform X4

    UniProtKB/TrEMBL
    A0A8I3W917, U3DVK3
    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:191 → 878
    Sec3_C; Exocyst complex component Sec3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.