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PDE12 phosphodiesterase 12 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100403371, updated on 8-Mar-2024

Summary

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Gene symbol
PDE12
Gene description
phosphodiesterase 12
See related
Ensembl:ENSCJAG00000019905
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See PDE12 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 15 NC_071456.1 (33157459..33163005)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 15 NC_048397.1 (33845649..33851544)

Chromosome 15 - NC_071456.1Genomic Context describing neighboring genes Neighboring gene dynein axonemal heavy chain 12 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene ARF GTPase 4 Neighboring gene DENN domain containing 6A Neighboring gene ubiquitin-conjugating enzyme E2 N-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5'-RNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2',5'-phosphodiesterase 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071456.1 Reference mCalJa1.2.pat.X

    Range
    33157459..33163005
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002758494.6 → XP_002758540.1  2',5'-phosphodiesterase 12

    See identical proteins and their annotated locations for XP_002758540.1

    UniProtKB/TrEMBL
    F7A264
    Related
    ENSCJAP00000037009.2
    Conserved Domains (1) summary
    cl00490
    Location:298 → 607
    EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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