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GFRA2 GDNF family receptor alpha 2 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100402519, updated on 6-Jun-2024

Summary

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Gene symbol
GFRA2
Gene description
GDNF family receptor alpha 2
See related
Ensembl:ENSCJAG00000020432
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See GFRA2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 13 NC_071454.1 (16888916..16989019, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 13 NC_048395.1 (16972830..17073737, complement)

Chromosome 13 - NC_071454.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103787467 Neighboring gene exportin 7 Neighboring gene docking protein 2 Neighboring gene uncharacterized LOC118146759 Neighboring gene uncharacterized LOC128929418

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDNF family receptor alpha-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071454.1 Reference mCalJa1.2.pat.X

    Range
    16888916..16989019 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035270100.2 → XP_035125991.1  GDNF family receptor alpha-2 isoform X1

    UniProtKB/TrEMBL
    F7CQF9, U3EFF3
    Conserved Domains (2) summary
    smart00907
    Location:40 → 113
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:251 → 347
    GDNF; GDNF/GAS1 domain

  2. XM_054243776.1 → XP_054099751.1  GDNF family receptor alpha-2 isoform X3

    UniProtKB/TrEMBL
    A0A2R8MKG1, A0A2R8MYG7

  3. XM_035270107.2 → XP_035125998.1  GDNF family receptor alpha-2 isoform X3

    UniProtKB/TrEMBL
    A0A2R8MKG1, A0A2R8MYG7
    Conserved Domains (1) summary
    pfam02351
    Location:118 → 214
    GDNF; GDNF/GAS1 domain

  4. XM_035270103.1 → XP_035125994.1  GDNF family receptor alpha-2 isoform X2

    UniProtKB/TrEMBL
    A0A2R8MYG7
    Conserved Domains (1) summary
    pfam02351
    Location:180 → 276
    GDNF; GDNF/GAS1 domain
Nucleotide Protein
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