GMPPA GDP-mannose pyrophosphorylase A [Callithrix jacchus (white-tufted-ear marmoset)] - Gene

Summary

Gene symbol: GMPPA
Gene description: GDP-mannose pyrophosphorylase A
See related: Ensembl:ENSCJAG00000011849
Gene type: protein coding
RefSeq status: MODEL
Organism: Callithrix jacchus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 6

Exon count:: 14

Annotation release	Status	Assembly	Chr	Location
RS_2023_03	current	mCalJa1.2.pat.X (GCF_011100555.1)	6	NC_071447.1 (137724883..137732924)
105	previous assembly	Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1)	6	NC_048388.1 (138948399..138956423)

Chromosome 6 - NC_071447.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Markers

ECD10814 (e-PCR)
- UniSTS:291853

REN53091 (e-PCR)
- UniSTS:377891

REN53092 (e-PCR)
- UniSTS:377892

REN53093 (e-PCR)
- UniSTS:377893

REN53100 (e-PCR)
- UniSTS:377900

REN53101 (e-PCR)
- UniSTS:377901

REN53118 (e-PCR)
- UniSTS:377918

REN53119 (e-PCR)
- UniSTS:377919

REN53120 (e-PCR)
- UniSTS:377920

REN53121 (e-PCR)
- UniSTS:377921

REN53124 (e-PCR)
- UniSTS:377924

REN53125 (e-PCR)
- UniSTS:377925

REN53129 (e-PCR)
- UniSTS:377929

stSG633043 (e-PCR)
- UniSTS:460400

ECD00873 (e-PCR)
- UniSTS:281982

A007H40 (e-PCR)
- UniSTS:15539

MARC_7531-7532:996687912:1 (e-PCR)
- UniSTS:269788

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables transferase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in biosynthetic process	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: mannose-1-phosphate guanyltransferase alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

NC_071447.1 Reference mCalJa1.2.pat.X

Range

137724883..137732924

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_054257973.1 → XP_054113948.1 mannose-1-phosphate guanyltransferase alpha isoform X1

UniProtKB/TrEMBL

U3F0V4
XM_054257970.1 → XP_054113945.1 mannose-1-phosphate guanyltransferase alpha isoform X1

UniProtKB/TrEMBL

U3F0V4
XM_008999553.4 → XP_008997801.1 mannose-1-phosphate guanyltransferase alpha isoform X2

See identical proteins and their annotated locations for XP_008997801.1

UniProtKB/TrEMBL

A0A8I3W5N8, B0KWJ2, F6T3R0

Related

ENSCJAP00000047106.1

Conserved Domains (2) summary

cd06428
Location:4 → 261

M1P_guanylylT_A_like_N; N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase

cl00160
Location:289 → 355

LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...
XM_054257978.1 → XP_054113953.1 mannose-1-phosphate guanyltransferase alpha isoform X5
XM_008999552.4 → XP_008997800.1 mannose-1-phosphate guanyltransferase alpha isoform X2

See identical proteins and their annotated locations for XP_008997800.1

UniProtKB/TrEMBL

A0A8I3W5N8, B0KWJ2, F6T3R0

Conserved Domains (2) summary

cd06428
Location:4 → 261

M1P_guanylylT_A_like_N; N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase

cl00160
Location:289 → 355

LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...
XM_054257976.1 → XP_054113951.1 mannose-1-phosphate guanyltransferase alpha isoform X3
XM_054257971.1 → XP_054113946.1 mannose-1-phosphate guanyltransferase alpha isoform X1

UniProtKB/TrEMBL

U3F0V4
XM_002749816.5 → XP_002749862.1 mannose-1-phosphate guanyltransferase alpha isoform X2

See identical proteins and their annotated locations for XP_002749862.1

UniProtKB/TrEMBL

A0A8I3W5N8, B0KWJ2, F6T3R0

Related

ENSCJAP00000021771.2

Conserved Domains (2) summary

cd06428
Location:4 → 261

M1P_guanylylT_A_like_N; N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase

cl00160
Location:289 → 355

LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...
XM_054257977.1 → XP_054113952.1 mannose-1-phosphate guanyltransferase alpha isoform X4
XM_054257972.1 → XP_054113947.1 mannose-1-phosphate guanyltransferase alpha isoform X1

UniProtKB/TrEMBL

U3F0V4
XM_035305859.2 → XP_035161750.1 mannose-1-phosphate guanyltransferase alpha isoform X2

UniProtKB/TrEMBL

A0A8I3W5N8, B0KWJ2, F6T3R0

Conserved Domains (2) summary

cd06428
Location:4 → 261

M1P_guanylylT_A_like_N; N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase

cl00160
Location:289 → 355

LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...
XM_054257974.1 → XP_054113949.1 mannose-1-phosphate guanyltransferase alpha isoform X1

UniProtKB/TrEMBL

U3F0V4
XM_054257975.1 → XP_054113950.1 mannose-1-phosphate guanyltransferase alpha isoform X1

UniProtKB/TrEMBL

U3F0V4