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HSD11B1 hydroxysteroid 11-beta dehydrogenase 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100401212, updated on 8-Mar-2024

Summary

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Gene symbol
HSD11B1
Gene description
hydroxysteroid 11-beta dehydrogenase 1
See related
Ensembl:ENSCJAG00000014941
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See HSD11B1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 19 NC_071460.1 (33469897..33524706)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 19 NC_048401.1 (34314977..34348533)

Chromosome 19 - NC_071460.1Genomic Context describing neighboring genes Neighboring gene laminin subunit beta 3 Neighboring gene G0/G1 switch 2 Neighboring gene adenosine receptor A2b-like Neighboring gene TRAF3 interacting protein 3 Neighboring gene chromosome 19 C1orf74 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 11-beta-hydroxysteroid dehydrogenase (NADP+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in steroid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
11-beta-hydroxysteroid dehydrogenase 1
Names
corticosteroid 11-beta-dehydrogenase isozyme 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071460.1 Reference mCalJa1.2.pat.X

    Range
    33469897..33524706
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054248243.1 → XP_054104218.1  11-beta-hydroxysteroid dehydrogenase 1

    UniProtKB/TrEMBL
    F7E8M5

  2. XM_002760759.6 → XP_002760805.1  11-beta-hydroxysteroid dehydrogenase 1

    See identical proteins and their annotated locations for XP_002760805.1

    UniProtKB/TrEMBL
    F7E8M5
    Related
    ENSCJAP00000027534.2
    Conserved Domains (1) summary
    cd05332
    Location:32 → 279
    11beta-HSD1_like_SDR_c; 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials