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ACADVL acyl-CoA dehydrogenase very long chain [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100399197, updated on 10-Oct-2024

Summary

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Gene symbol
ACADVL
Gene description
acyl-CoA dehydrogenase very long chain
See related
Ensembl:ENSCJAG00000016703
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See ACADVL in Genome Data Viewer
Location:
chromosome: 5
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 5 NC_071446.1 (69865794..69871399)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 5 NC_048387.1 (72457974..72463603)

Chromosome 5 - NC_071446.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118153707 Neighboring gene asialoglycoprotein receptor 1 Neighboring gene discs large MAGUK scaffold protein 4 Neighboring gene dishevelled segment polarity protein 2 Neighboring gene PHD finger protein 23

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty-acyl-CoA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables very-long-chain fatty acyl-CoA dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very long-chain specific acyl-CoA dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071446.1 Reference mCalJa1.2.pat.X

    Range
    69865794..69871399
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035299791.2 → XP_035155682.2  very long-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8J8Y1I0

  2. XM_035299792.2 → XP_035155683.2  very long-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials