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GAS7 growth arrest specific 7 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100395810, updated on 8-Mar-2024

Summary

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Gene symbol
GAS7
Gene description
growth arrest specific 7
See related
Ensembl:ENSCJAG00000012759
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See GAS7 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 5 NC_071446.1 (72525177..72808605, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 5 NC_048387.1 (75109890..75393294, complement)

Chromosome 5 - NC_071446.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118153720 Neighboring gene glucagon like peptide 2 receptor Neighboring gene recoverin Neighboring gene myosin heavy chain 13 Neighboring gene uncharacterized LOC108591730 Neighboring gene myosin heavy chain 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron projection morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
growth arrest-specific protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071446.1 Reference mCalJa1.2.pat.X

    Range
    72525177..72808605 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002747912.5 → XP_002747958.3  growth arrest-specific protein 7 isoform X1

    UniProtKB/TrEMBL
    U3C8A7
    Conserved Domains (3) summary
    cd07649
    Location:214 → 446
    F-BAR_GAS7; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Growth Arrest Specific protein 7
    cd11829
    Location:5 → 57
    SH3_GAS7; Src homology 3 domain of Growth Arrest Specific protein 7
    pfam16623
    Location:109 → 201
    WW_FCH_linker; Unstructured linker region between on GAS7 protein

  2. XM_035300035.2 → XP_035155926.1  growth arrest-specific protein 7 isoform X4

    Conserved Domains (2) summary
    cd07649
    Location:150 → 382
    F-BAR_GAS7; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Growth Arrest Specific protein 7
    pfam16623
    Location:45 → 137
    WW_FCH_linker; Unstructured linker region between on GAS7 protein

  3. XM_008996523.4 → XP_008994771.1  growth arrest-specific protein 7 isoform X3

    UniProtKB/TrEMBL
    F6WN67, F7IQ92
    Related
    ENSCJAP00000049078.1
    Conserved Domains (2) summary
    cd07649
    Location:154 → 386
    F-BAR_GAS7; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Growth Arrest Specific protein 7
    pfam16623
    Location:49 → 141
    WW_FCH_linker; Unstructured linker region between on GAS7 protein

  4. XM_008996524.4 → XP_008994772.1  growth arrest-specific protein 7 isoform X4

    UniProtKB/TrEMBL
    F7IQ09
    Related
    ENSCJAP00000046427.1
    Conserved Domains (2) summary
    cd07649
    Location:150 → 382
    F-BAR_GAS7; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Growth Arrest Specific protein 7
    pfam16623
    Location:45 → 137
    WW_FCH_linker; Unstructured linker region between on GAS7 protein

  5. XM_035300034.2 → XP_035155925.1  growth arrest-specific protein 7 isoform X2

    Conserved Domains (2) summary
    cd07649
    Location:174 → 406
    F-BAR_GAS7; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Growth Arrest Specific protein 7
    pfam16623
    Location:116 → 161
    WW_FCH_linker; Unstructured linker region between on GAS7 protein
Nucleotide Protein
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