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EEF1E1 eukaryotic translation elongation factor 1 epsilon 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100395431, updated on 8-Mar-2024

Summary

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Gene symbol
EEF1E1
Gene description
eukaryotic translation elongation factor 1 epsilon 1
See related
Ensembl:ENSCJAG00000021321
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See EEF1E1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 4 NC_071445.1 (20740468..20762276)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 4 NC_048386.1 (20419844..20441630)

Chromosome 4 - NC_071445.1Genomic Context describing neighboring genes Neighboring gene pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial-like Neighboring gene uncharacterized LOC118152787 Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 5 Neighboring gene dihydropyrimidinase-related protein 4-like Neighboring gene thioredoxin domain containing 5 Neighboring gene bone morphogenetic protein 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of DNA damage response, signal transduction by p53 class mediator IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of aminoacyl-tRNA synthetase multienzyme complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation elongation factor 1 epsilon-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071445.1 Reference mCalJa1.2.pat.X

    Range
    20740468..20762276
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002746240.4 → XP_002746286.1  eukaryotic translation elongation factor 1 epsilon-1 isoform X1

    See identical proteins and their annotated locations for XP_002746286.1

    UniProtKB/TrEMBL
    F7FSI4
    Related
    ENSCJAP00000039687.1
    Conserved Domains (1) summary
    cd10305
    Location:65 → 165
    GST_C_AIMP3; Glutathione S-transferase C-terminal-like, alpha helical domain of Aminoacyl tRNA synthetase complex-Interacting Multifunctional Protein 3

  2. XM_017970920.3 → XP_017826409.1  eukaryotic translation elongation factor 1 epsilon-1 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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