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DUSP18 dual specificity phosphatase 18 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100393841, updated on 8-Mar-2024

Summary

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Gene symbol
DUSP18
Gene description
dual specificity phosphatase 18
See related
Ensembl:ENSCJAG00000010674
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See DUSP18 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 1 NC_071442.1 (198329819..198345397, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 1 NC_048383.1 (199472826..199489409, complement)

Chromosome 1 - NC_071442.1Genomic Context describing neighboring genes Neighboring gene transcobalamin 2 Neighboring gene putative 60S ribosomal protein L13a protein RPL13AP3 Neighboring gene solute carrier family 35 member E4 Neighboring gene uncharacterized LOC128928836 Neighboring gene uncharacterized LOC118146652 Neighboring gene oxysterol binding protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables MAP kinase tyrosine/serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dual specificity protein phosphatase 18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071442.1 Reference mCalJa1.2.pat.X

    Range
    198329819..198345397 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009009341.4 → XP_009007589.1  dual specificity protein phosphatase 18 isoform X1

    See identical proteins and their annotated locations for XP_009007589.1

    UniProtKB/TrEMBL
    F6T250
    Conserved Domains (1) summary
    cd14573
    Location:19 → 176
    DUSP18_21; dual specificity protein phosphatases 18 and 21

  2. XM_009009318.4 → XP_009007566.1  dual specificity protein phosphatase 18 isoform X1

    See identical proteins and their annotated locations for XP_009007566.1

    UniProtKB/TrEMBL
    F6T250
    Conserved Domains (1) summary
    cd14573
    Location:19 → 176
    DUSP18_21; dual specificity protein phosphatases 18 and 21

  3. XM_009009345.4 → XP_009007593.1  dual specificity protein phosphatase 18 isoform X1

    See identical proteins and their annotated locations for XP_009007593.1

    UniProtKB/TrEMBL
    F6T250
    Conserved Domains (1) summary
    cd14573
    Location:19 → 176
    DUSP18_21; dual specificity protein phosphatases 18 and 21

  4. XM_035269664.2 → XP_035125555.1  dual specificity protein phosphatase 18 isoform X1

    UniProtKB/TrEMBL
    F6T250
    Conserved Domains (1) summary
    cd14573
    Location:19 → 176
    DUSP18_21; dual specificity protein phosphatases 18 and 21

  5. XM_002743682.4 → XP_002743728.1  dual specificity protein phosphatase 18 isoform X1

    See identical proteins and their annotated locations for XP_002743728.1

    UniProtKB/TrEMBL
    F6T250
    Conserved Domains (1) summary
    cd14573
    Location:19 → 176
    DUSP18_21; dual specificity protein phosphatases 18 and 21

  6. XM_009009328.4 → XP_009007576.1  dual specificity protein phosphatase 18 isoform X1

    See identical proteins and their annotated locations for XP_009007576.1

    UniProtKB/TrEMBL
    F6T250
    Related
    ENSCJAP00000019666.2
    Conserved Domains (1) summary
    cd14573
    Location:19 → 176
    DUSP18_21; dual specificity protein phosphatases 18 and 21

  7. XM_017979177.1 → XP_017834666.1  dual specificity protein phosphatase 18 isoform X2

    UniProtKB/TrEMBL
    A0A8I3WQV1
Nucleotide Protein
Heading Accession and Version

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