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INAVA innate immunity activator [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100393615, updated on 8-Mar-2024

Summary

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Gene symbol
INAVA
Gene description
innate immunity activator
See related
Ensembl:ENSCJAG00000005256
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Also known as
C19H1orf106
Orthologs
human mouse all
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Genomic context

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See INAVA in Genome Data Viewer
Location:
chromosome: 19
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 19 NC_071460.1 (24049446..24074560)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 19 NC_048401.1 (25036109..25061187)

Chromosome 19 - NC_071460.1Genomic Context describing neighboring genes Neighboring gene calmodulin regulated spectrin associated protein family member 2 Neighboring gene protein MIX23-like Neighboring gene G protein-coupled receptor 25 Neighboring gene maestro heat-like repeat-containing protein family member 7 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC118149421 Neighboring gene kinesin family member 21B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in adherens junction maintenance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
innate immunity activator protein
Names
chromosome 19 C1orf106 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071460.1 Reference mCalJa1.2.pat.X

    Range
    24049446..24074560
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002760627.6 → XP_002760673.4  innate immunity activator protein isoform X1

    UniProtKB/TrEMBL
    F7GBF7
    Conserved Domains (1) summary
    pfam11819
    Location:231 → 359
    DUF3338; Domain of unknown function (DUF3338)

  2. XM_054248332.1 → XP_054104307.1  innate immunity activator protein isoform X3

  3. XM_035280667.2 → XP_035136558.1  innate immunity activator protein isoform X2

    Conserved Domains (1) summary
    pfam11819
    Location:8 → 136
    DUF3338; Domain of unknown function (DUF3338)

  4. XM_035280668.1 → XP_035136559.1  innate immunity activator protein isoform X3

    Conserved Domains (1) summary
    pfam11819
    Location:2 → 130
    DUF3338; Domain of unknown function (DUF3338)

  5. XM_054248331.1 → XP_054104306.1  innate immunity activator protein isoform X3

  6. XM_008985369.3 → XP_008983617.1  innate immunity activator protein isoform X3

    See identical proteins and their annotated locations for XP_008983617.1

    UniProtKB/TrEMBL
    F7IQ07
    Related
    ENSCJAP00000046429.1
    Conserved Domains (1) summary
    pfam11819
    Location:2 → 130
    DUF3338; Domain of unknown function (DUF3338)
Nucleotide Protein
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