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TP53BP1 tumor protein p53 binding protein 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100392591, updated on 8-Mar-2024

Summary

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Gene symbol
TP53BP1
Gene description
tumor protein p53 binding protein 1
See related
Ensembl:ENSCJAG00000002786
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See TP53BP1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
32
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 10 NC_071451.1 (26886530..27007851, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 10 NC_048392.1 (27658984..27784753, complement)

Chromosome 10 - NC_071451.1Genomic Context describing neighboring genes Neighboring gene zinc finger and SCAN domain containing 29 Neighboring gene tubulin gamma complex component 4 Neighboring gene microtubule associated protein 1A Neighboring gene diphosphoinositol pentakisphosphate kinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development of the first marmoset-specific DNA microarray (EUMAMA): a new genetic tool for large-scale expression profiling in a non-human primate. Datson NA, et al. BMC Genomics, 2007 Jun 25. PMID 17592630, Free PMC Article
  2. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TP53-binding protein 1
Names
tumor suppressor p53 binding protein 1-like protein
tumor suppressor p53-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071451.1 Reference mCalJa1.2.pat.X

    Range
    26886530..27007851 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035259465.2 → XP_035115356.2  TP53-binding protein 1 isoform X2

  2. XM_035259463.2 → XP_035115354.2  TP53-binding protein 1 isoform X2

  3. XM_009005328.4 → XP_009003576.3  TP53-binding protein 1 isoform X1

  4. XM_035259464.2 → XP_035115355.2  TP53-binding protein 1 isoform X2

  5. XM_054239556.1 → XP_054095531.1  TP53-binding protein 1 isoform X3

  6. XM_035259469.2 → XP_035115360.2  TP53-binding protein 1 isoform X5

  7. XM_035259468.2 → XP_035115359.2  TP53-binding protein 1 isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials