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ADH1A alcohol dehydrogenase 1A (class I), alpha polypeptide [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100391782, updated on 18-Sep-2024

Summary

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Gene symbol
ADH1A
Gene description
alcohol dehydrogenase 1A (class I), alpha polypeptide
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
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Genomic context

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See ADH1A in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 3 NC_071444.1 (94202391..94217290)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 3 NC_048385.1 (96815707..96830620)

Chromosome 3 - NC_071444.1Genomic Context describing neighboring genes Neighboring gene alcohol dehydrogenase 1B (class I), beta polypeptide Neighboring gene uncharacterized LOC103791929 Neighboring gene alcohol dehydrogenase 1C-like Neighboring gene uncharacterized LOC118152241 Neighboring gene rRNA-processing protein FCF1 homolog Neighboring gene uncharacterized LOC103791933

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables all-trans-retinol dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in retinoic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retinol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alcohol dehydrogenase 1C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071444.1 Reference mCalJa1.2.pat.X

    Range
    94202391..94217290
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003732464.5 → XP_003732512.2  alcohol dehydrogenase 1C

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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