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EIF4G2 eukaryotic translation initiation factor 4 gamma 2 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100390541, updated on 8-Mar-2024

Summary

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Gene symbol
EIF4G2
Gene description
eukaryotic translation initiation factor 4 gamma 2
See related
Ensembl:ENSCJAG00000010633
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See EIF4G2 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 11 NC_071452.1 (73370983..73382892, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 11 NC_048393.1 (74558467..74570545, complement)

Chromosome 11 - NC_071452.1Genomic Context describing neighboring genes Neighboring gene inositol 1,4,5-triphosphate receptor associated 1 Neighboring gene CTR9 homolog, Paf1/RNA polymerase II complex component Neighboring gene uncharacterized LOC128929152 Neighboring gene small nucleolar RNA SNORD97 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene zinc finger BED-type containing 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of eukaryotic translation initiation factor 4F complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 4 gamma 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071452.1 Reference mCalJa1.2.pat.X

    Range
    73370983..73382892 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017977905.3 → XP_017833394.1  eukaryotic translation initiation factor 4 gamma 2

    UniProtKB/TrEMBL
    F7BT44
    Conserved Domains (4) summary
    cd11559
    Location:534 → 670
    W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
    smart00544
    Location:338 → 451
    MA3; Domain in DAP-5, eIF4G, MA-3 and other proteins
    PRK12757
    Location:230 → 337
    PRK12757; cell division protein FtsN; Provisional
    pfam02854
    Location:1 → 102
    MIF4G; MIF4G domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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