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DNAJB6 DnaJ heat shock protein family (Hsp40) member B6 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100388945, updated on 10-Oct-2024

Summary

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Gene symbol
DNAJB6
Gene description
DnaJ heat shock protein family (Hsp40) member B6
See related
Ensembl:ENSCJAG00000005288
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See DNAJB6 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 8 NC_071449.1 (88146783..88226908, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 8 NC_048390.1 (88922616..89002778, complement)

Chromosome 8 - NC_071449.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type N2 Neighboring gene ATP-binding cassette sub-family F member 2-like Neighboring gene putative proline-rich protein 21 Neighboring gene 60S acidic ribosomal protein P1-like Neighboring gene U6 spliceosomal RNA Neighboring gene ubiquitin protein ligase E3C Neighboring gene uncharacterized LOC128928436 Neighboring gene uncharacterized LOC118143726

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071449.1 Reference mCalJa1.2.pat.X

    Range
    88146783..88226908 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035254260.2 → XP_035110151.1  dnaJ homolog subfamily B member 6 isoform X4

    UniProtKB/TrEMBL
    U3DQR4, U3EFD2, U3FY68
    Conserved Domains (1) summary
    COG0484
    Location:2 → 108
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  2. XM_035254255.2 → XP_035110146.2  dnaJ homolog subfamily B member 6 isoform X2

  3. XM_054237508.1 → XP_054093483.1  dnaJ homolog subfamily B member 6 isoform X1

  4. XM_035254257.2 → XP_035110148.2  dnaJ homolog subfamily B member 6 isoform X2

  5. XM_035254256.2 → XP_035110147.2  dnaJ homolog subfamily B member 6 isoform X2

  6. XM_002751792.6 → XP_002751838.1  dnaJ homolog subfamily B member 6 isoform X4

    See identical proteins and their annotated locations for XP_002751838.1

    UniProtKB/TrEMBL
    U3DQR4, U3EFD2, U3FY68
    Related
    ENSCJAP00000009704.2
    Conserved Domains (1) summary
    COG0484
    Location:2 → 108
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  7. XM_035254258.2 → XP_035110149.1  dnaJ homolog subfamily B member 6 isoform X3

    UniProtKB/TrEMBL
    A0A8I4A3K5, U3FY68
    Conserved Domains (1) summary
    COG0484
    Location:2 → 108
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  8. XM_054237509.1 → XP_054093484.1  dnaJ homolog subfamily B member 6 isoform X5

    UniProtKB/TrEMBL
    U3E4X3
Nucleotide Protein
Heading Accession and Version

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