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GPX2 glutathione peroxidase 2 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100388368, updated on 8-Mar-2024

Summary

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Gene symbol
GPX2
Gene description
glutathione peroxidase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Also known as
GPx-2; GPx-GI; GSHPx-2; GSHPx-GI
Orthologs
human mouse all
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Genomic context

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See GPX2 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 10 NC_071451.1 (95492296..95496947, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 10 NC_048392.1 (96149984..96154635, complement)

Chromosome 10 - NC_071451.1Genomic Context describing neighboring genes Neighboring gene spectrin beta, erythrocytic Neighboring gene uncharacterized LOC118144962 Neighboring gene churchill domain containing 1 Neighboring gene RAB15, member RAS oncogene family Neighboring gene 39S ribosomal protein L11, mitochondrial-like Neighboring gene farnesyltransferase, CAAX box, subunit beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutathione peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutathione peroxidase 2
Names
Glutathione peroxidase-gastrointestinal
glutathione peroxidase 2 (gastrointestinal)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071451.1 Reference mCalJa1.2.pat.X

    Range
    95492296..95496947 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002807244.4 → XP_002807290.2  glutathione peroxidase 2

    UniProtKB/TrEMBL
    A0A2R8NCZ7
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0EF98.2 GenPept UniProtKB/Swiss-Prot:Q0EF98

Gene LinkOut

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Molecular Biology Databases
Research Materials