U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

POMGNT2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100387902, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
POMGNT2
Gene description
protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-)
See related
Ensembl:ENSCJAG00000001724
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Also known as
GTDC2
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See POMGNT2 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 15 NC_071456.1 (19625676..19650792, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 15 NC_048397.1 (20336645..20361758, complement)

Chromosome 15 - NC_071456.1Genomic Context describing neighboring genes Neighboring gene KRAB box domain containing 1 Neighboring gene golgi associated kinase 1A Neighboring gene uncharacterized LOC118147838 Neighboring gene ATP synthase subunit gamma, mitochondrial-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein O-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2
Names
glycosyltransferase-like domain containing 2
glycosyltransferase-like domain-containing protein 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071456.1 Reference mCalJa1.2.pat.X

    Range
    19625676..19650792 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008981477.4 → XP_008979725.2  protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2

    UniProtKB/TrEMBL
    F7FUQ7, U3BFX0
    Conserved Domains (2) summary
    cd00063
    Location:493 → 580
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl15705
    Location:320 → 395
    DUF563; Protein of unknown function (DUF563)

  2. XM_008981478.4 → XP_008979726.2  protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2

    UniProtKB/TrEMBL
    F7FUQ7, U3BFX0
    Conserved Domains (2) summary
    cd00063
    Location:493 → 580
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl15705
    Location:320 → 395
    DUF563; Protein of unknown function (DUF563)

  3. XM_017964819.3 → XP_017820308.2  protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2

    UniProtKB/TrEMBL
    F7FUQ7, U3BFX0
    Conserved Domains (2) summary
    cd00063
    Location:493 → 580
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl15705
    Location:320 → 395
    DUF563; Protein of unknown function (DUF563)

  4. XM_035274981.2 → XP_035130872.1  protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2

    UniProtKB/TrEMBL
    F7FUQ7, U3BFX0
    Conserved Domains (2) summary
    cd00063
    Location:493 → 580
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl15705
    Location:320 → 395
    DUF563; Protein of unknown function (DUF563)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.