U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DNASE1L2 deoxyribonuclease 1 like 2 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100387777, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
DNASE1L2
Gene description
deoxyribonuclease 1 like 2
See related
Ensembl:ENSCJAG00000014997
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See DNASE1L2 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 12 NC_071453.1 (2252017..2254876, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 12 NC_048394.1 (2311597..2314621, complement)

Chromosome 12 - NC_071453.1Genomic Context describing neighboring genes Neighboring gene RNA binding protein with serine rich domain 1 Neighboring gene uncharacterized LOC118146165 Neighboring gene enoyl-CoA delta isomerase 1 Neighboring gene E4F transcription factor 1 Neighboring gene phosphoglycolate phosphatase

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA nuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
deoxyribonuclease-1-like 2
Names
deoxyribonuclease I like 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071453.1 Reference mCalJa1.2.pat.X

    Range
    2252017..2254876 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035266543.2 → XP_035122434.1  deoxyribonuclease-1-like 2 isoform X2

    UniProtKB/TrEMBL
    F7GZL3
    Conserved Domains (1) summary
    smart00476
    Location:23 → 276
    DNaseIc; deoxyribonuclease I

  2. XM_035266542.2 → XP_035122433.1  deoxyribonuclease-1-like 2 isoform X1

    UniProtKB/TrEMBL
    F7GZL3
    Conserved Domains (1) summary
    cl00490
    Location:23 → 304
    EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.