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PCED1A PC-esterase domain containing 1A [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100386281, updated on 10-Oct-2024

Summary

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Gene symbol
PCED1A
Gene description
PC-esterase domain containing 1A
See related
Ensembl:ENSCJAG00000021056
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Also known as
FAM113A
Orthologs
human mouse all
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Genomic context

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See PCED1A in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 5 NC_071446.1 (8250136..8256391, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 5 NC_048387.1 (8164103..8169814, complement)

Chromosome 5 - NC_071446.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128932011 Neighboring gene EBF family member 4 Neighboring gene chromosome 5 C20orf141 homolog Neighboring gene carboxypeptidase X, M14 family member 1 Neighboring gene transmembrane protein 239 Neighboring gene VPS16 core subunit of CORVET and HOPS complexes Neighboring gene protein tyrosine phosphatase receptor type A Neighboring gene heat shock protein beta-1-like Neighboring gene L-lactate dehydrogenase A chain-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
PC-esterase domain-containing protein 1A
Names
family with sequence similarity 113, member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071446.1 Reference mCalJa1.2.pat.X

    Range
    8250136..8256391 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054255175.1 → XP_054111150.1  PC-esterase domain-containing protein 1A

    UniProtKB/TrEMBL
    F7GV11, U3ER92

  2. XM_002747299.5 → XP_002747345.1  PC-esterase domain-containing protein 1A

    See identical proteins and their annotated locations for XP_002747345.1

    UniProtKB/TrEMBL
    F7GV11, F7GV20, U3ER92
    Related
    ENSCJAP00000039198.1
    Conserved Domains (1) summary
    cd01842
    Location:34 → 266
    SGNH_hydrolase_like_5; SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site ...
Nucleotide Protein
Heading Accession and Version

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