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ZBTB44 zinc finger and BTB domain containing 44 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100385851, updated on 6-Jun-2024

Summary

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Gene symbol
ZBTB44
Gene description
zinc finger and BTB domain containing 44
See related
Ensembl:ENSCJAG00000009451
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 11 NC_071452.1 (27787627..27876978, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 11 NC_048393.1 (27749878..27839649, complement)

Chromosome 11 - NC_071452.1Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase Mu 1-like Neighboring gene ST14 transmembrane serine protease matriptase Neighboring gene ubiquitin-40S ribosomal protein S27a-like Neighboring gene ATP-dependent RNA helicase DDX18-like Neighboring gene small nucleolar RNA U3 Neighboring gene uncharacterized LOC128929099 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 44

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071452.1 Reference mCalJa1.2.pat.X

    Range
    27787627..27876978 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035265103.2 → XP_035120994.1  zinc finger and BTB domain-containing protein 44 isoform X8

    Conserved Domains (4) summary
    COG5048
    Location:14 → 94
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:46 → 66
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:134 → 156
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:58 → 83
    zf-H2C2_2; Zinc-finger double domain

  2. XM_035265102.2 → XP_035120993.1  zinc finger and BTB domain-containing protein 44 isoform X7

    Conserved Domains (3) summary
    COG5048
    Location:14 → 95
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:47 → 67
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:135 → 157
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_035265101.2 → XP_035120992.1  zinc finger and BTB domain-containing protein 44 isoform X6

    Conserved Domains (4) summary
    COG5048
    Location:46 → 112
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:64 → 84
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:152 → 174
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:76 → 101
    zf-H2C2_2; Zinc-finger double domain

  4. XM_009007120.4 → XP_009005368.1  zinc finger and BTB domain-containing protein 44 isoform X1

    See identical proteins and their annotated locations for XP_009005368.1

    UniProtKB/TrEMBL
    A0A2R8MJU0, F7IEV5
    Conserved Domains (6) summary
    COG5048
    Location:383 → 449
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:401 → 421
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:489 → 511
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:15 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam00096
    Location:487 → 508
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:413 → 438
    zf-H2C2_2; Zinc-finger double domain

  5. XM_054241733.1 → XP_054097708.1  zinc finger and BTB domain-containing protein 44 isoform X1

    UniProtKB/TrEMBL
    A0A2R8MJU0, F7IEV5

  6. XM_054241732.1 → XP_054097707.1  zinc finger and BTB domain-containing protein 44 isoform X1

    UniProtKB/TrEMBL
    A0A2R8MJU0, F7IEV5

  7. XM_054241734.1 → XP_054097709.1  zinc finger and BTB domain-containing protein 44 isoform X1

    UniProtKB/TrEMBL
    A0A2R8MJU0, F7IEV5

  8. XM_035265100.2 → XP_035120991.1  zinc finger and BTB domain-containing protein 44 isoform X5

    Conserved Domains (4) summary
    COG5048
    Location:351 → 431
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:383 → 403
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:15 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam13465
    Location:395 → 420
    zf-H2C2_2; Zinc-finger double domain

  9. XM_035265099.2 → XP_035120990.1  zinc finger and BTB domain-containing protein 44 isoform X3

    UniProtKB/TrEMBL
    A0A2R8MJU0
    Conserved Domains (6) summary
    COG5048
    Location:351 → 431
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:383 → 403
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:471 → 493
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:15 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam00096
    Location:469 → 490
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:395 → 420
    zf-H2C2_2; Zinc-finger double domain

  10. XM_002754592.5 → XP_002754638.1  zinc finger and BTB domain-containing protein 44 isoform X4

    See identical proteins and their annotated locations for XP_002754638.1

    UniProtKB/TrEMBL
    U3CPK5
    Related
    ENSCJAP00000017347.1
    Conserved Domains (4) summary
    COG5048
    Location:383 → 449
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:401 → 421
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:21 → 128
    BTB; BTB/POZ domain
    pfam13465
    Location:413 → 438
    zf-H2C2_2; Zinc-finger double domain

  11. XM_009007119.4 → XP_009005367.1  zinc finger and BTB domain-containing protein 44 isoform X1

    See identical proteins and their annotated locations for XP_009005367.1

    UniProtKB/TrEMBL
    A0A2R8MJU0, F7IEV5
    Conserved Domains (6) summary
    COG5048
    Location:383 → 449
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:401 → 421
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:489 → 511
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:15 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam00096
    Location:487 → 508
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:413 → 438
    zf-H2C2_2; Zinc-finger double domain

  12. XM_054241735.1 → XP_054097710.1  zinc finger and BTB domain-containing protein 44 isoform X1

    UniProtKB/TrEMBL
    A0A2R8MJU0, F7IEV5

  13. XM_054241738.1 → XP_054097713.1  zinc finger and BTB domain-containing protein 44 isoform X1

    UniProtKB/TrEMBL
    A0A2R8MJU0, F7IEV5

  14. XM_054241737.1 → XP_054097712.1  zinc finger and BTB domain-containing protein 44 isoform X1

    UniProtKB/TrEMBL
    A0A2R8MJU0, F7IEV5

  15. XM_035265105.2 → XP_035120996.1  zinc finger and BTB domain-containing protein 44 isoform X9

    Conserved Domains (2) summary
    sd00017
    Location:12 → 32
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:10 → 32
    zf-C2H2; Zinc finger, C2H2 type

  16. XM_035265106.2 → XP_035120997.1  zinc finger and BTB domain-containing protein 44 isoform X9

    Conserved Domains (2) summary
    sd00017
    Location:12 → 32
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:10 → 32
    zf-C2H2; Zinc finger, C2H2 type

  17. XM_035265104.2 → XP_035120995.1  zinc finger and BTB domain-containing protein 44 isoform X9

    Conserved Domains (2) summary
    sd00017
    Location:12 → 32
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:10 → 32
    zf-C2H2; Zinc finger, C2H2 type

  18. XM_054241736.1 → XP_054097711.1  zinc finger and BTB domain-containing protein 44 isoform X1

    UniProtKB/TrEMBL
    A0A2R8MJU0, F7IEV5

  19. XM_054241739.1 → XP_054097714.1  zinc finger and BTB domain-containing protein 44 isoform X1

    UniProtKB/TrEMBL
    A0A2R8MJU0, F7IEV5

  20. XM_017977653.3 → XP_017833142.1  zinc finger and BTB domain-containing protein 44 isoform X2

    UniProtKB/TrEMBL
    A0A2R8MJU0
    Conserved Domains (7) summary
    smart00225
    Location:32 → 128
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:351 → 432
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:384 → 404
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:472 → 494
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:382 → 404
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:21 → 125
    BTB; BTB/POZ domain
    pfam13465
    Location:396 → 421
    zf-H2C2_2; Zinc-finger double domain

  21. XM_009007121.4 → XP_009005369.1  zinc finger and BTB domain-containing protein 44 isoform X1

    See identical proteins and their annotated locations for XP_009005369.1

    UniProtKB/TrEMBL
    A0A2R8MJU0, F7IEV5
    Conserved Domains (6) summary
    COG5048
    Location:383 → 449
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:401 → 421
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:489 → 511
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:15 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam00096
    Location:487 → 508
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:413 → 438
    zf-H2C2_2; Zinc-finger double domain

  22. XM_054241730.1 → XP_054097705.1  zinc finger and BTB domain-containing protein 44 isoform X1

    UniProtKB/TrEMBL
    A0A2R8MJU0, F7IEV5

  23. XM_054241731.1 → XP_054097706.1  zinc finger and BTB domain-containing protein 44 isoform X1

    UniProtKB/TrEMBL
    A0A2R8MJU0, F7IEV5
Nucleotide Protein
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