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LOC100384269 uncharacterized LOC100384269 [ Zea mays ]

Gene ID: 100384269, updated on 14-Dec-2023

Summary

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Gene symbol
LOC100384269
Gene description
uncharacterized LOC100384269
Locus tag
ZEAMMB73_Zm00001d017946
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
GRMZM5G824439; GRMZM5G883043
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Genomic context

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See LOC100384269 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
21
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 5 NC_050100.1 (213160805..213183173, complement)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 5 NC_024463.2 (210559036..210581399, complement)

Chromosome 5 - NC_050100.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103627690 Neighboring gene ADP-ribosylation factor-like A1A Neighboring gene uncharacterized LOC100280598 Neighboring gene endoglucanase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Mediator of RNA polymerase II transcription subunit 23

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001350054.1 → NP_001336983.1  Mediator of RNA polymerase II transcription subunit 23

    Status: VALIDATED

    Source sequence(s)
    CABHLF010000016
    UniProtKB/TrEMBL
    A0A1D6HJF8, A0A804PM68
    Conserved Domains (1) summary
    pfam11573
    Location:739 → 1315
    Med23; Mediator complex subunit 23

RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050100.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    213160805..213183173 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001176834.1: Suppressed sequence

    Description
    NM_001176834.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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