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hspa1a.S heat shock protein family A (Hsp70) member 1A S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 100381020, updated on 17-Aug-2024

Summary

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Official Symbol
hspa1a.S
Official Full Name
heat shock protein family A (Hsp70) member 1A S homeolog
Primary source
Xenbase:XB-GENE-5842905
See related
EnsemblRapid:ENSXLAG00005010750
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
hsp72; hspa1; hsp70i; hspa1a; hspa1b; hsp70-1; hsp70-1a; hspa1a.L
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Genomic context

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Location:
chromosome: 7S
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7S NC_054384.1 (105018581..105030295, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016694862.1 (769617..813973)

Chromosome 7S - NC_054384.1Genomic Context describing neighboring genes Neighboring gene protein SMG9-like Neighboring gene SMG9 nonsense mediated mRNA decay factor S homeolog Neighboring gene uncharacterized LOC121396586 Neighboring gene zinc finger protein 70

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Hsp72 mediates stronger antigen-dependent non-classical MHC class Ib anti-tumor responses than hsc73 in Xenopus laevis. Nedelkovska H, et al. Cancer Immun, 2013. PMID 23390375, Free PMC Article
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. hsp72 was more potent than hsc73 in generating protective immune responses against the class Ia-negative 15/0 tumors.
    Title: Hsp72 mediates stronger antigen-dependent non-classical MHC class Ib anti-tumor responses than hsc73 in Xenopus laevis.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
heat shock protein family A (Hsp70) member 1A S homeolog
Names
heat shock 70kDa protein 1A
heat shock protein family A (Hsp70) member 1A L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001174009.1 → NP_001167480.1  heat shock protein family A (Hsp70) member 1A S homeolog

    See identical proteins and their annotated locations for NP_001167480.1

    Status: PROVISIONAL

    Source sequence(s)
    BC077998
    UniProtKB/TrEMBL
    A0A974HBW2, Q6AZH8
    Related
    ENSXLAP00005031737.1, ENSXLAT00005032512.1
    Conserved Domains (1) summary
    PTZ00009
    Location:1 → 612
    PTZ00009; heat shock 70 kDa protein; Provisional

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    105018581..105030295 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041570337.1 → XP_041426271.1  heat shock protein family A (Hsp70) member 1A S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A974HBW2, Q6AZH8
    Related
    ENSXLAP00005031741.1, ENSXLAT00005032516.1
    Conserved Domains (1) summary
    PTZ00009
    Location:1 → 612
    PTZ00009; heat shock 70 kDa protein; Provisional
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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