U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

tcap.S titin-cap S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 100381005, updated on 4-Nov-2024

Summary

Official Symbol
tcap.S
Official Full Name
titin-cap S homeolog
Primary source
Xenbase:XB-GENE-1013769
Locus tag
XELAEV_18045928mg
See related
EnsemblRapid:ENSXLAG00005029002 AllianceGenome:Xenbase:XB-GENE-1013769
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
tcap; telethonin
Summary
Predicted to enable protein-macromolecule adaptor activity; titin Z domain binding activity; and titin binding activity. Predicted to be a structural constituent of muscle. Predicted to act upstream of or within several processes, including detection of muscle stretch; myofibril assembly; and striated muscle contraction. Predicted to be located in Z disc. Human ortholog(s) of this gene implicated in autosomal recessive limb-girdle muscular dystrophy type 2G and hypertrophic cardiomyopathy 25. Orthologous to human TCAP (titin-cap). [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See tcap.S in Genome Data Viewer
Location:
chromosome: 9_10S
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (2006468..2008507, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (1923196..1925405, complement)

Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene receptor tyrosine-protein kinase erbB-2 Neighboring gene phenylethanolamine N-methyltransferase S homeolog Neighboring gene melanoregulin Neighboring gene StAR related lipid transfer domain containing 3 S homeolog

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables protein-macromolecule adaptor activity IEA
Inferred from Electronic Annotation
more info
 
enables structural constituent of muscle IEA
Inferred from Electronic Annotation
more info
 
enables titin Z domain binding IEA
Inferred from Electronic Annotation
more info
 
enables titin binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    2006468..2008507 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018237978.2XP_018093467.1  telethonin

    UniProtKB/TrEMBL
    A0A1L8EKU5, A0A974BRY6
    Related
    ENSXLAP00005086469.1, ENSXLAT00005088131.1