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extl2 exostosin-like glycosyltransferase 2 [ Salmo salar (Atlantic salmon) ]

Gene ID: 100380460, updated on 8-Mar-2024

Summary

Gene symbol
extl2
Gene description
exostosin-like glycosyltransferase 2
See related
Ensembl:ENSSSAG00000004860
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Orthologs
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Genomic context

See extl2 in Genome Data Viewer
Location:
chromosome: ssa03
Exon count:
6
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa03 NC_059444.1 (10459897..10466286, complement)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa03 NC_027302.1 (8723425..8729821, complement)

Chromosome ssa03 - NC_059444.1Genomic Context describing neighboring genes Neighboring gene presenilins-associated rhomboid-like protein, mitochondrial Neighboring gene vascular cell adhesion protein 1 Neighboring gene oxidoreductase ZK1290.5 Neighboring gene zinc finger protein 629

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
exostosin-like 2
Names
exotoses (multiple)-like 2
NP_001167216.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001173745.1NP_001167216.1  exostosin-like 2

    See identical proteins and their annotated locations for NP_001167216.1

    Status: PROVISIONAL

    Source sequence(s)
    BT059398
    UniProtKB/TrEMBL
    C0HAP2
    Related
    ENSSSAP00000009758.2, ENSSSAT00000010414.2
    Conserved Domains (1) summary
    pfam09258
    Location:75330
    Glyco_transf_64; Glycosyl transferase family 64 domain

RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059444.1 Reference Ssal_v3.1

    Range
    10459897..10466286 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)