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LOC100377401 CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2-like [ Saccoglossus kowalevskii ]

Gene ID: 100377401, updated on 19-Oct-2023

Summary

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Gene symbol
LOC100377401
Gene description
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2-like
See related
EnsemblRapid:LOC100377401
Gene type
protein coding
RefSeq status
MODEL
Organism
Saccoglossus kowalevskii
Lineage
Eukaryota; Metazoa; Hemichordata; Enteropneusta; Harrimaniidae; Saccoglossus
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Genomic context

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See LOC100377401 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Skow_1.1 (GCF_000003605.2) Unplaced Scaffold NW_003155251.1 (331466..337226)

NW_003155251.1Genomic Context describing neighboring genes Neighboring gene GLIPR1-like protein 1-like Neighboring gene uncharacterized LOC102801431

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003155251 unplaced scaffold reference Skow_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside (CMP) alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saccoglossus kowalevskii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Skow_1.1 Primary Assembly

Genomic

  1. NW_003155251.1 Reference Skow_1.1 Primary Assembly

    Range
    331466..337226
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002741450.2 → XP_002741496.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2-like

    UniProtKB/TrEMBL
    A0A0U2UAG8
    Related
    XP_002741496.1, XM_002741450.2
    Conserved Domains (1) summary
    pfam00777
    Location:86 → 346
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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Molecular Biology Databases
Research Materials