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LOC100376206 2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like [ Saccoglossus kowalevskii ]

Gene ID: 100376206, updated on 19-Oct-2023

Summary

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Gene symbol
LOC100376206
Gene description
2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like
See related
EnsemblRapid:LOC100376206
Gene type
protein coding
RefSeq status
MODEL
Organism
Saccoglossus kowalevskii
Lineage
Eukaryota; Metazoa; Hemichordata; Enteropneusta; Harrimaniidae; Saccoglossus
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Genomic context

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See LOC100376206 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Skow_1.1 (GCF_000003605.2) Unplaced Scaffold NW_003119926.1 (169247..178271)

NW_003119926.1Genomic Context describing neighboring genes Neighboring gene cysteine protease ATG4B-like Neighboring gene uncharacterized LOC100376055 Neighboring gene UDP-glucuronosyltransferase 2C1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003119926 unplaced scaffold reference Skow_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saccoglossus kowalevskii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Skow_1.1 Primary Assembly

Genomic

  1. NW_003119926.1 Reference Skow_1.1 Primary Assembly

    Range
    169247..178271
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006814796.1 → XP_006814859.1  2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like

    Related
    XP_006814859.1, XM_006814796.1
    Conserved Domains (4) summary
    PHA03392
    Location:582 → 804
    egt; ecdysteroid UDP-glucosyltransferase; Provisional
    pfam00201
    Location:357 → 807
    UDPGT; UDP-glucoronosyl and UDP-glucosyl transferase
    cl00293
    Location:357 → 389
    B12-binding_like; B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, ...
    cl02808
    Location:12 → 91
    RT_like; RT_like: Reverse transcriptase (RT, RNA-dependent DNA polymerase)_like family. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, ...
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials