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LOC100368362 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like [ Saccoglossus kowalevskii ]

Gene ID: 100368362, updated on 19-Oct-2023

Summary

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Gene symbol
LOC100368362
Gene description
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like
See related
EnsemblRapid:LOC100368362
Gene type
protein coding
RefSeq status
MODEL
Organism
Saccoglossus kowalevskii
Lineage
Eukaryota; Metazoa; Hemichordata; Enteropneusta; Harrimaniidae; Saccoglossus
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Genomic context

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See LOC100368362 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Skow_1.1 (GCF_000003605.2) Unplaced Scaffold NW_003108588.1 (16325..19012)

NW_003108588.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain-containing protein 11-like Neighboring gene uncharacterized LOC100368512 Neighboring gene uncharacterized LOC102801806

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003108588 unplaced scaffold reference Skow_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saccoglossus kowalevskii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Skow_1.1 Primary Assembly

Genomic

  1. NW_003108588.1 Reference Skow_1.1 Primary Assembly

    Range
    16325..19012
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002731324.1 → XP_002731370.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like

    Related
    XP_002731370.1, XM_002731324.1
    Conserved Domains (1) summary
    cl21608
    Location:152 → 317
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
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