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LOC100366886 protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like [ Saccoglossus kowalevskii ]

Gene ID: 100366886, updated on 19-Oct-2023

Summary

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Gene symbol
LOC100366886
Gene description
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like
See related
EnsemblRapid:LOC100366886
Gene type
protein coding
RefSeq status
MODEL
Organism
Saccoglossus kowalevskii
Lineage
Eukaryota; Metazoa; Hemichordata; Enteropneusta; Harrimaniidae; Saccoglossus
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Genomic context

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See LOC100366886 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current Skow_1.1 (GCF_000003605.2) Unplaced Scaffold NW_003156251.1 (35011..57593, complement)

NW_003156251.1Genomic Context describing neighboring genes Neighboring gene F-box protein At1g78280-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003156251 unplaced scaffold reference Skow_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saccoglossus kowalevskii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Skow_1.1 Primary Assembly

Genomic

  1. NW_003156251.1 Reference Skow_1.1 Primary Assembly

    Range
    35011..57593 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006825359.1 → XP_006825422.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like

    Related
    XP_006825422.1, XM_006825359.1
    Conserved Domains (2) summary
    cd13937
    Location:87 → 218
    PANDER_GnT-1_2_like; PANDER-like domain of N-acetylglucosaminyltransferases
    cl11394
    Location:273 → 600
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials