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Ubbl1 ubiquitin B like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100363494, updated on 2-Nov-2024

Summary

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Official Symbol
Ubbl1provided by RGD
Official Full Name
ubiquitin B like 1provided by RGD
Primary source
RGD:2322951
See related
EnsemblRapid:ENSRNOG00000068757 AllianceGenome:RGD:2322951
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to be located in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Ubbl1 in Genome Data Viewer
Location:
14p11
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (34667025..34667344)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (34312949..34313236)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (36865771..36866058)

Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 46 Neighboring gene WW domain binding protein 11, pseudogene 2 Neighboring gene uncharacterized LOC108352851 Neighboring gene uncharacterized LOC134481743 Neighboring gene spermatogenesis associated 18

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ubiquitin
Names
ubiquitin B-like
ubiquitin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086032.1 Reference GRCr8

    Range
    34667025..34667344
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002728110.5 → XP_002728156.1  ubiquitin

    See identical proteins and their annotated locations for XP_002728156.1

    UniProtKB/TrEMBL
    A0A8I5ZTA8, A0A8I6A5Y3, A6HFD8
    Related
    ENSRNOP00000080550.1, ENSRNOT00000095558.2
    Conserved Domains (2) summary
    cd01803
    Location:1 → 76
    Ubiquitin; Ubiquitin
    smart00213
    Location:1 → 71
    UBQ; Ubiquitin homologues
Nucleotide Protein Strain
Heading Accession and Version

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