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Krbox1 KRAB box domain containing 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100360613, updated on 17-Aug-2024

Summary

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Symbol
Krbox1provided by RGD
Full Name
KRAB box domain containing 1provided by RGD
Primary source
RGD:2321744
See related
AllianceGenome:RGD:2321744
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Orthologous to human KRBOX1 (KRAB box domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward (RPKM 31.8) See more
Orthologs
human all
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Genomic context

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See Krbox1 in Genome Data Viewer
Location:
8q32
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (130474743..130481529)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (121597254..121604048)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (130567589..130574328)

Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene atypical chemokine receptor 2 Neighboring gene cytochrome P450 family 8 subfamily B member 1 Neighboring gene poly(rC) binding protein 2 like 1 Neighboring gene golgi associated kinase 1A Neighboring gene protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Other Names

  • rCG25329-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086026.1 Reference GRCr8

    Range
    130474743..130481529
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001839588.3 RNA Sequence

  2. XR_010054532.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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