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PIGT phosphatidylinositol glycan anchor biosynthesis class T [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100359334, updated on 8-Mar-2024

Summary

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Gene symbol
PIGT
Gene description
phosphatidylinositol glycan anchor biosynthesis class T
See related
Ensembl:ENSOCUG00000009109
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See PIGT in Genome Data Viewer
Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 4 NC_067377.1 (3197071..3205754, complement)

Chromosome 4 - NC_067377.1Genomic Context describing neighboring genes Neighboring gene WAP four-disulfide core domain 2 Neighboring gene ras-related protein Rab-9A-like Neighboring gene dysbindin domain containing 2 Neighboring gene SYS1 golgi trafficking protein Neighboring gene uncharacterized LOC127482781 Neighboring gene TP53 target 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067377.1 Chromosome 4 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in attachment of GPI anchor to protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GPI-anchor transamidase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI transamidase component PIG-T

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067377.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    3197071..3205754 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008274765.3 → XP_008272987.1  GPI transamidase component PIG-T isoform X2

    UniProtKB/TrEMBL
    A0A5F9CRA0
    Related
    ENSOCUP00000035879.1
    Conserved Domains (1) summary
    pfam04113
    Location:2 → 289
    Gpi16; Gpi16 subunit, GPI transamidase component

  2. XM_002721231.4 → XP_002721277.3  GPI transamidase component PIG-T isoform X1

    UniProtKB/TrEMBL
    G1SWK5
    Related
    ENSOCUP00000007872.3
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials