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PRG3 proteoglycan 3, pro eosinophil major basic protein 2 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100357888, updated on 8-Mar-2024

Summary

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Gene symbol
PRG3
Gene description
proteoglycan 3, pro eosinophil major basic protein 2
See related
Ensembl:ENSOCUG00000003089
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See PRG3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 1 NC_067374.1 (204210078..204214919, complement)

Chromosome 1 - NC_067374.1Genomic Context describing neighboring genes Neighboring gene structure specific recognition protein 1 Neighboring gene purinergic receptor P2X 3 Neighboring gene proteoglycan 2, pro eosinophil major basic protein Neighboring gene solute carrier family 43 member 3 Neighboring gene uncharacterized LOC108177752

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067374.1 Chromosome 1 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proteoglycan 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067374.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    204210078..204214919 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008271333.3 → XP_008269555.1  proteoglycan 3 isoform X2

    UniProtKB/TrEMBL
    G1SJ03
    Related
    ENSOCUP00000002685.3
    Conserved Domains (1) summary
    cd03598
    Location:98 → 210
    CLECT_EMBP_like; C-type lectin-like domain (CTLD) of the type found in the human proteins, eosinophil major basic protein (EMBP) and prepro major basic protein homolog (MBPH)

  2. XM_008271325.3 → XP_008269547.1  proteoglycan 3 isoform X1

    Conserved Domains (1) summary
    cd03598
    Location:98 → 215
    CLECT_EMBP_like; C-type lectin-like domain (CTLD) of the type found in the human proteins, eosinophil major basic protein (EMBP) and prepro major basic protein homolog (MBPH)
Nucleotide Protein
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