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CERS2 ceramide synthase 2 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100355139, updated on 8-Mar-2024

Summary

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Gene symbol
CERS2
Gene description
ceramide synthase 2
See related
Ensembl:ENSOCUG00000022419
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See CERS2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 13 NC_067386.1 (41469152..41477286)

Chromosome 13 - NC_067386.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA46 Neighboring gene BCL2 interacting protein like Neighboring gene prune exopolyphosphatase 1 Neighboring gene MINDY lysine 48 deubiquitinase 1 Neighboring gene annexin A9 Neighboring gene SET domain bifurcated histone lysine methyltransferase 1 Neighboring gene aryl hydrocarbon receptor nuclear translocator Neighboring gene cortexin domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067386.1 Chromosome 13 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide synthase 2
Names
LAG1 longevity assurance 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067386.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    41469152..41477286
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002715574.4 → XP_002715620.2  ceramide synthase 2

    Related
    ENSOCUP00000022876.3
    Conserved Domains (6) summary
    cd01858
    Location:209 → 365
    NGP_1; A novel nucleolar GTP-binding protein, circularly permuted subfamily of the Ras GTPases
    smart00724
    Location:747 → 948
    TLC; TRAM, LAG1 and CLN8 homology domains
    COG1161
    Location:190 → 460
    RbgA; Ribosome biogenesis GTPase A [Translation, ribosomal structure and biogenesis]
    cd00086
    Location:697 → 744
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam08153
    Location:44 → 174
    NGP1NT; NGP1NT (NUC091) domain
    cl21455
    Location:314 → 438
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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