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CNTN3 contactin 3 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100353847, updated on 8-Mar-2024

Summary

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Gene symbol
CNTN3
Gene description
contactin 3
See related
Ensembl:ENSOCUG00000013181
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 9 NC_067382.1 (73852616..74275778)

Chromosome 9 - NC_067382.1Genomic Context describing neighboring genes Neighboring gene small ubiquitin-related modifier 3-like Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC103349259 Neighboring gene uncharacterized LOC127492589

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067382.1 Chromosome 9 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell-cell adhesion mediator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
contactin-3
Names
contactin 3 (plasmacytoma associated)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067382.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    73852616..74275778
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051851466.1 → XP_051707426.1  contactin-3 isoform X2

    UniProtKB/TrEMBL
    G1T4X2

  2. XM_008260940.3 → XP_008259162.1  contactin-3 isoform X1

    Conserved Domains (5) summary
    smart00410
    Location:420 → 497
    IG_like; Immunoglobulin like
    cd00063
    Location:599 → 696
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:319 → 404
    I-set; Immunoglobulin I-set domain
    pfam00041
    Location:806 → 892
    fn3; Fibronectin type III domain
    cl11960
    Location:228 → 316
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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