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CHPT1 choline phosphotransferase 1 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100353669, updated on 8-Mar-2024

Summary

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Gene symbol
CHPT1
Gene description
choline phosphotransferase 1
See related
Ensembl:ENSOCUG00000009276
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See CHPT1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 4 NC_067377.1 (88522237..88557059)

Chromosome 4 - NC_067377.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127491062 Neighboring gene myosin binding protein C1 Neighboring gene microRNA mir-12094 Neighboring gene synaptonemal complex protein 3 Neighboring gene N-acetylglucosamine-1-phosphate transferase subunits alpha and beta Neighboring gene 60S ribosomal protein L12-like Neighboring gene DNA damage regulated autophagy modulator 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067377.1 Chromosome 4 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables diacylglycerol cholinephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ethanolaminephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylethanolamine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cholinephosphotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067377.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    88522237..88557059
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017342057.2 → XP_017197546.1  cholinephosphotransferase 1 isoform X2

    UniProtKB/TrEMBL
    G1SWX6

  2. XM_008256976.3 → XP_008255198.1  cholinephosphotransferase 1 isoform X1

    UniProtKB/TrEMBL
    G1SWX6
    Related
    ENSOCUP00000008018.2
    Conserved Domains (1) summary
    cl00453
    Location:25 → 213
    CDP-OH_P_transf; CDP-alcohol phosphatidyltransferase

RNA

  1. XR_001793389.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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