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GALNTL5 polypeptide N-acetylgalactosaminyltransferase like 5 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100353435, updated on 8-Mar-2024

Summary

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Gene symbol
GALNTL5
Gene description
polypeptide N-acetylgalactosaminyltransferase like 5
See related
Ensembl:ENSOCUG00000011307
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See GALNTL5 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 13 NC_067386.1 (13676127..13729116)

Chromosome 13 - NC_067386.1Genomic Context describing neighboring genes Neighboring gene protein kinase AMP-activated non-catalytic subunit gamma 2 Neighboring gene uncharacterized LOC127493536 Neighboring gene 60S ribosomal protein L27-like Neighboring gene uncharacterized LOC127493802 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 11 Neighboring gene lysine methyltransferase 2C Neighboring gene chaperonin containing TCP1 subunit 8 like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067386.1 Chromosome 13 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in spermatid development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067386.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    13676127..13729116
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051857100.1 → XP_051713060.1  inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5 isoform X2

  2. XM_002715078.4 → XP_002715124.1  inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5 isoform X1

    UniProtKB/TrEMBL
    G1T122
    Related
    ENSOCUP00000009734.3
    Conserved Domains (2) summary
    cd02510
    Location:133 → 429
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG1216
    Location:130 → 356
    GT2; Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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